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added more pages, including the provenance ones (activity, agent, ass…
…ociation, and usage), also added the location ones that were missing cut and generic location, and tried to update sequence annotation and component definition to make it so that it only uses the correct location type but this needs more work
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137 changes: 137 additions & 0 deletions
137
frontend/components/Viewing/PageJSON/Types/Activity.json
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,137 @@ | ||
| { | ||
| "type": "http://www.w3.org/ns/prov#Activity", | ||
| "prefixes": [ | ||
| "PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>", | ||
| "PREFIX dcterms: <http://purl.org/dc/terms/>", | ||
| "PREFIX dc: <http://purl.org/dc/elements/1.1/>", | ||
| "PREFIX sbh: <http://wiki.synbiohub.org/wiki/Terms/synbiohub#>", | ||
| "PREFIX prov: <http://www.w3.org/ns/prov#>", | ||
| "PREFIX sbol: <http://sbols.org/v2#>", | ||
| "PREFIX xsd: <http://www.w3.org/2001/XMLSchema#>", | ||
| "PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>", | ||
| "PREFIX purl: <http://purl.obolibrary.org/obo/>" | ||
| ], | ||
| "metadata": [], | ||
| "tables": [ | ||
| { | ||
| "icon": "faVials", | ||
| "title": "Usages", | ||
| "rootPredicate": "prov:qualifiedUsage", | ||
| "sections": [ | ||
| { | ||
| "title": "Usage", | ||
| "infoLink": "https://www.w3.org/ns/prov#Usage", | ||
| "predicates": [ | ||
| "sbol:displayId" | ||
| ], | ||
| "stripAfter": "#", | ||
| "link": "$<usageLink>" | ||
| }, | ||
| { | ||
| "title": "usageLink", | ||
| "predicates": [], | ||
| "hide": true | ||
| }, | ||
| { | ||
| "title": "Entity", | ||
| "infoLink": "https://www.w3.org/ns/prov#entity", | ||
| "predicates": [ | ||
| "prov:entity" | ||
| ], | ||
| "link": "$<entityLink>" | ||
| }, | ||
| { | ||
| "title": "entityLink", | ||
| "predicates": [], | ||
| "hide": true | ||
| }, | ||
| { | ||
| "title": "Roles", | ||
| "infoLink": "https://www.w3.org/ns/prov#hasRole", | ||
| "predicates": [ | ||
| "prov:hadRole" | ||
| ], | ||
| "stripAfter": "#", | ||
| "link": "$<roleLink>" | ||
| }, | ||
| { | ||
| "title": "roleLink", | ||
| "predicates": [], | ||
| "hide": true | ||
| } | ||
| ] | ||
| }, | ||
| { | ||
| "icon": "faVials", | ||
| "title": "Associations", | ||
| "rootPredicate": "prov:qualifiedAssociation", | ||
| "sections": [ | ||
| { | ||
| "title": "Association", | ||
| "infoLink": "https://www.w3.org/ns/prov#Association", | ||
| "predicates": [ | ||
| "sbol:displayId" | ||
| ], | ||
| "stripAfter": "#", | ||
| "link": "$<associationLink>" | ||
| }, | ||
| { | ||
| "title": "associationLink", | ||
| "predicates": [], | ||
| "hide": true | ||
| }, | ||
| { | ||
| "title": "Agent", | ||
| "infoLink": "https://www.w3.org/ns/prov#Agent", | ||
| "predicates": [ | ||
| "prov:agent" | ||
| ], | ||
| "link": "$<agentLink>" | ||
| }, | ||
| { | ||
| "title": "agentLink", | ||
| "predicates": [], | ||
| "hide": true | ||
| }, | ||
| { | ||
| "title": "Plan", | ||
| "infoLink": "https://www.w3.org/ns/prov#Plan", | ||
| "predicates": [ | ||
| "prov:hadPlan" | ||
| ], | ||
| "link": "$<planLink>" | ||
| }, | ||
| { | ||
| "title": "planLink", | ||
| "predicates": [], | ||
| "hide": true | ||
| }, | ||
| { | ||
| "title": "Roles", | ||
| "infoLink": "https://www.w3.org/ns/prov#hasRole", | ||
| "predicates": [ | ||
| "prov:hadRole" | ||
| ], | ||
| "link": "$<rolesLink>", | ||
| "stripAfter": "#" | ||
|
|
||
| }, | ||
| { | ||
| "title": "rolesLink", | ||
| "predicates": [ | ||
| "prov:hadRole" | ||
| ], | ||
| "hide": true | ||
| } | ||
| ] | ||
| } | ||
| ], | ||
| "pages": [ | ||
| "$TABLES[Usages]", | ||
| "$TABLES[Associations]", | ||
| "Details", | ||
| "Other Properties", | ||
| "Member of these Collections", | ||
| "Attachments" | ||
| ] | ||
| } |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,23 @@ | ||
| { | ||
| "type": "http://www.w3.org/ns/prov#Agent", | ||
| "prefixes": [ | ||
| "PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>", | ||
| "PREFIX dcterms: <http://purl.org/dc/terms/>", | ||
| "PREFIX dc: <http://purl.org/dc/elements/1.1/>", | ||
| "PREFIX sbh: <http://wiki.synbiohub.org/wiki/Terms/synbiohub#>", | ||
| "PREFIX prov: <http://www.w3.org/ns/prov#>", | ||
| "PREFIX sbol: <http://sbols.org/v2#>", | ||
| "PREFIX xsd: <http://www.w3.org/2001/XMLSchema#>", | ||
| "PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>", | ||
| "PREFIX purl: <http://purl.obolibrary.org/obo/>" | ||
| ], | ||
| "metadata": [], | ||
| "tables": [ | ||
| ], | ||
| "pages": [ | ||
| "Details", | ||
| "Other Properties", | ||
| "Member of these Collections", | ||
| "Attachments" | ||
| ] | ||
| } |
57 changes: 57 additions & 0 deletions
57
frontend/components/Viewing/PageJSON/Types/Association.json
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,57 @@ | ||
| { | ||
| "type": "http://www.w3.org/ns/prov#Association", | ||
| "prefixes": [ | ||
| "PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>", | ||
| "PREFIX dcterms: <http://purl.org/dc/terms/>", | ||
| "PREFIX dc: <http://purl.org/dc/elements/1.1/>", | ||
| "PREFIX sbh: <http://wiki.synbiohub.org/wiki/Terms/synbiohub#>", | ||
| "PREFIX prov: <http://www.w3.org/ns/prov#>", | ||
| "PREFIX sbol: <http://sbols.org/v2#>", | ||
| "PREFIX xsd: <http://www.w3.org/2001/XMLSchema#>", | ||
| "PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>", | ||
| "PREFIX purl: <http://purl.obolibrary.org/obo/>" | ||
| ], | ||
| "metadata": [ | ||
| { | ||
| "title": "Roles", | ||
| "icon": "faVials", | ||
| "infoLink": "https://sbols.org/v2#role", | ||
| "rootPredicate": "prov:hadRole", | ||
| "sections": [ | ||
| { | ||
| "title": "name", | ||
| "predicates": [ | ||
|
|
||
| ], | ||
| "stripAfter":"#", | ||
| "link": "$<roleLink>" | ||
| }, | ||
| { | ||
| "title": "roleLink", | ||
| "predicates": [], | ||
| "hide": true | ||
| } | ||
| ] | ||
| }, | ||
| { | ||
| "title": "Agent", | ||
| "icon": "faVials", | ||
| "infoLink": "https://www.w3.org/ns/prov#agent", | ||
| "rootPredicate": "prov:agent", | ||
| "sections": [ | ||
| { | ||
| "title": "name", | ||
| "predicates": [ | ||
| ], | ||
| "link": "$<This>" | ||
| } | ||
| ] | ||
| } | ||
| ], | ||
| "tables": [], | ||
| "pages": [ | ||
| "Details", | ||
| "Other Properties", | ||
| "Attachments" | ||
| ] | ||
| } |
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