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Release v0.9.0
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@priesgo priesgo released this 15 Mar 15:12
· 104 commits to master since this release
v0.9.0
6e0b91d
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Learn about vigilant mode.

Changes

  • Added a custom step phasing of clonal mutations. All clonal mutations (ie: clonal/not clonal determined by VAF) on the same amino acid are merged into a single mutation. This is not a read-backed phasing implementation which would allow to also phase intrahost mutations.
  • Removed vt for decomposing complex mutations as the dependency was causing difficult to diagnose troubles in conda environments and it has virtually no impact in the output
  • Improved documentation
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