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@gfardell gfardell released this 01 Aug 15:12
· 405 commits to master since this release
v22.0.0
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Install using files from https://anaconda.org/ccpi/cil/files?version=22.0.0&channel=main

This is a major release and there may be some backward incompatibilities. See the full list of changes for details.

Significantly the CIL-ASTRA repository and package has now been deprecated. All relevant code has been relicensed and absorbed in to the CIL package. There is no change in functionality.

V22.0.0 change log:

  • Strongly convex functionality in TotalVariation and FGP_TV Functions
  • Refactored KullbackLeibler function class. Fix bug on gradient method for SIRF objects
  • Numba added as a CIL requirement
  • Simplify initialisation of CentreOfRotation.ImageSharpness with new parameter backend
  • Added ISTA algorithm. Improve inheritance of proximal gradient algorithms
  • Updated interface to plugins.tigre/plugins.astra FBP and ProjectionOperator classes
  • Update NikonDataReader to parse and set up geometry with: ObjectTilt CentreOfRotationTop and CentreOfRotationBottom
  • Cleaned up unit test structure and output
  • Removal of deprecated code:
    • AcquisitionGeometry __init__ no longer returns a configured geometry, use factory create methods instead
    • subset method removed, use get_slice or reorder methods
    • NikonDataReader normalize kwarg removed, use normalise
    • Algorithms initialisation x_init kwarg removed, use initial
    • Removed deprecated numpy calls
  • DataProcessors use weak-reference to input data
  • Merged CIL-ASTRA code in to CIL repository simplifying test, build and install procedures
    • Modules not moved should be considered deprecated
    • CIL remains licensed as APACHE-2.0
    • Minor bug fixes to the CPU 2D Parallel-beam FBP
  • Add ndim property for DataContainer class
  • Fixes show_geometry compatibility issue with matplotlib 3.5
  • Added ZEISSDataReader with cone/parallel beam, slicing, TXM Functionality
  • Raise exception if filename or data haven't been set in NexusDataWriter
  • Fixes error when update_objective_interval is set to 0 in an algorithm run
  • Deprecated:
    • TXRMDataReader is deprecated in favour of ZEISSDataReader
  • GitHub Actions:
    • Update to version 0.1.1 of lauramurgatroyd/build-sphinx-action for building the documentation - ensures docs are always built from cil master
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