markdown source builds

Auto-generated via `{sandpaper}`
Source  : 2720278
Branch  : main
Author  : Milan Malfait <[email protected]>
Time    : 2024-11-05 10:45:13 +0000
Message : Update 24 packages (#36)

Co-authored-by: milanmlft <[email protected]>

config.yaml

@@ -0,0 +1,112 @@
+---
+#------------------------------------------------------------
+# Values for this lesson.
+#------------------------------------------------------------
+
+# Which carpentry is this (swc, dc, lc, or cp)?
+# swc: Software Carpentry
+# dc: Data Carpentry
+# lc: Library Carpentry
+# cp: Carpentries (to use for instructor training for instance)
+# incubator: The Carpentries Incubator
+carpentry: "swc"
+
+# Overall title for pages.
+title: "R for AMR Epidemiology"
+
+# Date the lesson was created (YYYY-MM-DD, this is empty by default)
+created: "2015-04-18"
+
+# Comma-separated list of keywords for the lesson
+keywords: "software, data, lesson, The Carpentries"
+
+# Life cycle stage of the lesson
+# possible values: pre-alpha, alpha, beta, stable
+life_cycle: "stable"
+
+# License of the lesson materials (recommended CC-BY 4.0)
+license: "CC-BY 4.0"
+
+# Link to the source repository for this lesson
+source: "https://github.com/UCL-ARC/r-amr-epidemiology"
+
+# Default branch of your lesson
+branch: "main"
+
+# Who to contact if there are any issues
+contact: "[email protected]"
+
+# Navigation ------------------------------------------------
+#
+# Use the following menu items to specify the order of
+# individual pages in each dropdown section. Leave blank to
+# include all pages in the folder.
+#
+# Example -------------
+#
+# episodes:
+# - introduction.md
+# - first-steps.md
+#
+# learners:
+# - setup.md
+#
+# instructors:
+# - instructor-notes.md
+#
+# profiles:
+# - one-learner.md
+# - another-learner.md
+
+# Order of episodes in your lesson
+episodes:
+  - 01-rstudio-intro.Rmd
+  - 02-project-intro.Rmd
+  - 03-seeking-help.Rmd
+  - 04-data-structures-part1.Rmd
+  - 05-data-structures-part2.Rmd
+  - 06-filedir.md
+  - 07-basics.md
+  - 08-setup.md
+  - 09-create.md
+  - 10-changes.md
+  - 11-history.md
+  - 12-ignore.md
+  - 13-supplemental-rstudio.md
+  - 14-data-subsetting.Rmd
+  # - 07-control-flow.Rmd
+  - 15-plot-ggplot2.Rmd
+  # - 09-vectorization.Rmd
+  # - 10-functions.Rmd
+  - 16-writing-data.Rmd
+  - 17-github.md
+  - 18-collab.md
+  - 19-conflict.md
+  - 20-dplyr.Rmd
+  - 21-tidyr.Rmd
+  # basic stats
+  - 22-quarto.md
+  - 23-statistics.Rmd
+  - 24-linear-reg-broom.Rmd
+  - 25-linreg-diagnostics.Rmd
+  - 26-log-regression.Rmd
+  - 27-sql-r.Rmd
+  - 27-wrap-up.Rmd
+
+# Information for Learners
+learners:
+
+# Information for Instructors
+instructors:
+
+# Learner Profiles
+profiles:
+
+# Customisation ---------------------------------------------
+#
+# This space below is where custom yaml items (e.g. pinning
+# sandpaper and varnish versions) should live
+
+url: "https://UCL-ARC.github.io/R-AMR-Epidemiology"
+analytics: carpentries
+lang: en