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Merge pull request #2778 from WardF/cdash-script.wif
Add ctest script to CI.
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| ### | ||
| # Build hdf5 dependencies and cache them in a combined directory. | ||
| ### | ||
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| name: Run CDash Ubuntu/Linux netCDF Tests | ||
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| on: workflow_dispatch | ||
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| jobs: | ||
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| build-deps-cdash: | ||
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| runs-on: ubuntu-latest | ||
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| strategy: | ||
| matrix: | ||
| hdf5: [ 1.10.8, 1.12.2, 1.14.0 ] | ||
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| steps: | ||
| - uses: actions/checkout@v3 | ||
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| - name: Install System dependencies | ||
| shell: bash -l {0} | ||
| run: sudo apt update && sudo apt install -y libaec-dev zlib1g-dev automake autoconf libcurl4-openssl-dev libjpeg-dev wget curl bzip2 m4 flex bison cmake libzip-dev doxygen openssl | ||
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| ### | ||
| # Installing libhdf5 | ||
| ### | ||
| - name: Cache libhdf5-${{ matrix.hdf5 }} | ||
| id: cache-hdf5 | ||
| uses: actions/cache@v3 | ||
| with: | ||
| path: ~/environments/${{ matrix.hdf5 }} | ||
| key: hdf5-${{ runner.os }}-${{ matrix.hdf5 }} | ||
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| - name: Build libhdf5-${{ matrix.hdf5 }} | ||
| if: steps.cache-hdf5.outputs.cache-hit != 'true' | ||
| run: | | ||
| set -x | ||
| wget https://support.hdfgroup.org/ftp/HDF/releases/HDF4.2.15/src/hdf-4.2.15.tar.bz2 | ||
| tar -jxf hdf-4.2.15.tar.bz2 | ||
| pushd hdf-4.2.15 | ||
| ./configure --prefix=${HOME}/environments/${{ matrix.hdf5 }} --disable-static --enable-shared --disable-fortran --disable-netcdf --with-szlib --enable-hdf4-xdr | ||
| make -j | ||
| make install -j | ||
| popd | ||
| wget https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-$(echo ${{ matrix.hdf5 }} | cut -d. -f 1,2)/hdf5-${{ matrix.hdf5 }}/src/hdf5-${{ matrix.hdf5 }}.tar.bz2 | ||
| tar -jxf hdf5-${{ matrix.hdf5 }}.tar.bz2 | ||
| pushd hdf5-${{ matrix.hdf5 }} | ||
| ./configure --disable-static --enable-shared --prefix=${HOME}/environments/${{ matrix.hdf5 }} --enable-hl --with-szlib | ||
| make -j | ||
| make install -j | ||
| popd | ||
| build-deps-parallel: | ||
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| runs-on: ubuntu-latest | ||
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| strategy: | ||
| matrix: | ||
| hdf5: [ 1.14.0 ] | ||
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| steps: | ||
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| - uses: actions/checkout@v3 | ||
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| - name: Install System dependencies | ||
| shell: bash -l {0} | ||
| run: sudo apt update && sudo apt install -y libaec-dev zlib1g-dev automake autoconf libcurl4-openssl-dev libjpeg-dev wget curl bzip2 m4 flex bison cmake libzip-dev mpich libmpich-dev | ||
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| ### | ||
| # Installing libhdf5 | ||
| ### | ||
| - name: Cache libhdf5-parallel-${{ matrix.hdf5 }} | ||
| id: cache-hdf5 | ||
| uses: actions/cache@v3 | ||
| with: | ||
| path: ~/environments/${{ matrix.hdf5 }} | ||
| key: hdf5-parallel-${{ runner.os }}-${{ matrix.hdf5 }} | ||
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| - name: Build libhdf5-${{ matrix.hdf5 }}-pnetcdf-1.12.3 | ||
| if: steps.cache-hdf5.outputs.cache-hit != 'true' | ||
| run: | | ||
| set -x | ||
| wget https://support.hdfgroup.org/ftp/HDF/releases/HDF4.2.15/src/hdf-4.2.15.tar.bz2 | ||
| tar -jxf hdf-4.2.15.tar.bz2 | ||
| pushd hdf-4.2.15 | ||
| CC=mpicc ./configure --prefix=${HOME}/environments/${{ matrix.hdf5 }} --disable-static --enable-shared --disable-fortran --disable-netcdf --with-szlib --enable-parallel --enable-hdf4-xdr | ||
| make -j | ||
| make install -j | ||
| popd | ||
| wget https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-$(echo ${{ matrix.hdf5 }} | cut -d. -f 1,2)/hdf5-${{ matrix.hdf5 }}/src/hdf5-${{ matrix.hdf5 }}.tar.bz2 | ||
| tar -jxf hdf5-${{ matrix.hdf5 }}.tar.bz2 | ||
| pushd hdf5-${{ matrix.hdf5 }} | ||
| CC=mpicc ./configure --disable-static --enable-shared --prefix=${HOME}/environments/${{ matrix.hdf5 }} --enable-hl --with-szlib --enable-parallel | ||
| make -j | ||
| make install -j | ||
| popd | ||
| wget https://parallel-netcdf.github.io/Release/pnetcdf-1.12.3.tar.gz | ||
| tar -zxf pnetcdf-1.12.3.tar.gz | ||
| pushd pnetcdf-1.12.3 | ||
| CC=mpicc ./configure --disable-static --enable-shared --prefix=${HOME}/environments/${{ matrix.hdf5 }} | ||
| make -j | ||
| make install -j | ||
| popd | ||
| ### | ||
| # Run CTest Serial Script | ||
| ### | ||
| nc-ctest-serial: | ||
| needs: build-deps-cdash | ||
| runs-on: ubuntu-latest | ||
| environment: CDashCI | ||
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| strategy: | ||
| matrix: | ||
| hdf5: [ 1.10.8, 1.12.2, 1.14.0 ] | ||
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| steps: | ||
| - uses: actions/checkout@v3 | ||
| with: | ||
| CDASH_TOKEN: ${{ secrets.CDASH_TOKEN }} | ||
| env: | ||
| CDASH_TOKEN: ${{ secrets.CDASH_TOKEN }} | ||
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| - name: Install System dependencies | ||
| shell: bash -l {0} | ||
| run: sudo apt update && sudo apt install -y libaec-dev zlib1g-dev automake autoconf libcurl4-openssl-dev libjpeg-dev wget curl bzip2 m4 flex bison cmake libzip-dev | ||
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| ### | ||
| # Set Environmental Variables | ||
| ### | ||
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| - run: echo "CMAKE_PREFIX_PATH=${HOME}/environments/${{ matrix.hdf5 }}/" >> $GITHUB_ENV | ||
| - run: echo "LD_LIBRARY_PATH=${HOME}/environments/${{ matrix.hdf5 }}/lib" >> $GITHUB_ENV | ||
| - run: echo "CTEST_OUTPUT_ON_FAILURE=1" >> $GITHUB_ENV | ||
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| ### | ||
| # Fetch Cache | ||
| ### | ||
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| - name: Fetch HDF Cache | ||
| id: cache-hdf5 | ||
| uses: actions/cache@v3 | ||
| with: | ||
| path: ~/environments/${{ matrix.hdf5 }} | ||
| key: hdf5-${{ runner.os }}-${{ matrix.hdf5 }} | ||
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| - name: Check Cache | ||
| shell: bash -l {0} | ||
| run: ls ${HOME}/environments/${{ matrix.hdf5 }} && ls ${HOME}/environments/${{ matrix.hdf5}}/lib | ||
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| - name: Run ctest serial script | ||
| shell: bash -l {0} | ||
| env: | ||
| CDASH_TOKEN: ${{ secrets.CDASH_TOKEN }} | ||
| run: | | ||
| mkdir build | ||
| cd build | ||
| LD_LIBRARY_PATH=${LD_LIBRARY_PATH} ctest -j 12 -V -S ../ctest_scripts/ctest_serial.ctest | ||
| - name: Verbose Output if CTest Failure | ||
| shell: bash -l {0} | ||
| run: | | ||
| cd build | ||
| LD_LIBRARY_PATH=${LD_LIBRARY_PATH} ctest -j 12 --rerun-failed --output-on-failure -VV | ||
| if: ${{ failure() }} |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,52 @@ | ||
| ### | ||
| # Standard CTest Script for testing netCDF. | ||
| # Requires a CDash Token. | ||
| # | ||
| # Set the CDASH_TOKEN environmental variable. | ||
| # | ||
| ### | ||
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| SET(CTEST_SOURCE_DIRECTORY "..") | ||
| SET(CTEST_BINARY_DIRECTORY ".") | ||
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| set(CDASH_TOKEN $ENV{CDASH_TOKEN}) | ||
| IF (CDASH_TOKEN) | ||
| MESSAGE("CDASH TOKEN FOUND") | ||
| ELSE (CDASH_TOKEN) | ||
| MESSAGE("NO CDASH TOKEN FOUND") | ||
| ENDIF (CDASH_TOKEN) | ||
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| SITE_NAME(local_site_name) | ||
| set(CTEST_SITE ${local_site_name}) | ||
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| set(CTEST_BUILD_CONFIGURATION "Profiling") | ||
| set(CTEST_CMAKE_GENERATOR "Unix Makefiles") | ||
| set(CTEST_BUILD_NAME "default") | ||
| set(CTEST_BUILD_CONFIGURATION "Profiling") | ||
| set(CTEST_DROP_METHOD "https") | ||
| set(CTEST_DROP_SITE_CDASH TRUE) | ||
| set(CTEST_PROJECT_NAME netcdf-c) | ||
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| find_program(CMAKE_COMMAND cmake) | ||
| find_program(CTEST_GIT_COMMAND NAMES git) | ||
| find_program(CTEST_COVERAGE_COMMAND NAMES gcov) | ||
| find_program(CTEST_MEMORYCHECK_COMMAND NAMES valgrind) | ||
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| set(CTEST_BUILD_OPTIONS "-DENABLE_COVERAGE_TESTS=TRUE -DENABLE_ERANGE_FILL=TRUE -DENABLE_LOGGING=TRUE -DENABLE_BYTERANGE=TRUE -DENABLE_LARGE_FILE_TESTS=FALSE") | ||
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| set(CTEST_DROP_METHOD https) | ||
| set(CTEST_DROP_SITE "cdash.unidata.ucar.edu:443") | ||
| set(CTEST_DROP_LOCATION "/submit.php?project=netcdf-c") | ||
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| set(CTEST_CONFIGURE_COMMAND "${CMAKE_COMMAND} -DCMAKE_BUILD_TYPE:STRING=${CTEST_BUILD_CONFIGURATION} ${CTEST_BUILD_OPTIONS} ${CTEST_SOURCE_DIRECTORY}") | ||
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| ctest_start("Experimental") | ||
| ctest_configure() | ||
| ctest_build() | ||
| ctest_test() | ||
| ctest_coverage() | ||
| if (NOT "${CDASH_TOKEN}" STREQUAL "") | ||
| ctest_submit(HTTPHEADER "Authorization: Bearer ${CDASH_TOKEN}") | ||
| endif() |
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