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It performs a search on PubMed looking for the <a
href="https://pubmed.ncbi.nlm.nih.gov/?term=agent-based+model&amp;sort=date"
target="_blank">latest papers about Agent-Based Models</a>. The last
update was on 2024-08-18 00:44:05.
update was on 2024-08-25 00:45:04.

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</div>

1. **Of criminals and cancer: The importance of social bonds and innate
morality on cellular societies.**
1. **Sensor-Based Fuzzy Inference of COVID-19 Transmission Risk in
Cruise Ships.**

Bukkuri A, Adler FR.
Triantafyllou G, Sovatzidi G, Dimas G, Kalozoumis PG, Drikakis D,
Kokkinakis IW, Markakis IA, Golna C, Iakovidis D.

Cells Dev. 2024 Aug 14:203964. doi: 10.1016/j.cdev.2024.203964.
Online ahead of print.
Stud Health Technol Inform. 2024 Aug 22;316:1817-1821. doi:
10.3233/SHTI240784.

> In this proof-of-concept paper, we draw on criminology to propose
> that cancer may alternatively be conceptualized as a relational
> problem: Although a cell’s genetics is essential, the influence of
> its interaction with other cells is equally important in
> determining its phenotype. …
> In contrast to previous approaches, the proposed method considers
> data captured by several sensors and the ship information system,
> according to a recently proposed smart ship design. Evaluation
> with agent-based simulations confirms the effectiveness of the
> proposed …
2. **Paradoxes in the coevolution of contagions and institutions.**
2. **Integrating mechanism-based T cell phenotypes into a model of
tumor-immune cell interactions.**

St-Onge J, Burgio G, Rosenblatt SF, Waring TM, Hébert-Dufresne L.
Tangella N, Cess CG, Ildefonso GV, Finley SD.

Proc Biol Sci. 2024 Aug;291(2028):20241117. doi:
10.1098/rspb.2024.1117. Epub 2024 Aug 14.
APL Bioeng. 2024 Aug 20;8(3):036111. doi: 10.1063/5.0205996.
eCollection 2024 Sep.

> Epidemic models study the spread of undesired agents through
> populations, be it infectious diseases through a country,
> misinformation in social media or pests infesting a region.
> …Instead, interventions commonly come from local institutions such
> as public health departme …
> It is difficult to gain mechanistic insights into the effects of
> cell-cell interactions in tumors using a purely experimental
> approach. However, computational modeling enables quantitative
> investigation of the tumor microenvironment, and agent-based
> modeli …
3. **Effect of rotavirus vaccination on the burden of rotavirus disease
and associated antibiotic use in India: A dynamic agent-based
simulation analysis.**
3. **Impact of varying pre-exposure prophylaxis programs on HIV and
Neisseria gonorrhoeae transmission among MSM in the Netherlands: a
modelling study.**

Gleason A, Kumar CK, Klein E, Laxminarayan R, Nandi A.
Reitsema M, Wallinga J, van Sighem AI, Bezemer D, van der Valk M,
van Aar F, Maria Heijne JC, Hoornenborg E, Rozhnova G, van Benthem
B, Xiridou M.

Vaccine. 2024 Aug 12;42(22):126211. doi:
10.1016/j.vaccine.2024.126211. Online ahead of print.
J Acquir Immune Defic Syndr. 2024 Aug 22. doi:
10.1097/QAI.0000000000003511. Online ahead of print.

> The objective of this study was to estimate the effects of the
> rotavirus vaccination program in India on disease burden and
> antibiotic misuse. METHODS: We built a dynamic agent-based model
> of rotavirus progression in children under five within each
> district i …
> SETTING: We assessed the impact of the PrEP program on
> transmission of HIV and Neisseria gonorrhea (NG) among MSM in the
> Netherlands and examined prospective variations of the program
> after 2024. METHODS: We used an agent-based model to estimate the
> effect of …
4. **Minds and markets as complex systems: an emerging approach to
cognitive economics.**
4. **How Model Organisms and Model Uncertainty Impact Our Understanding
of the Risk of Sublethal Impacts of Toxicants to Survival and Growth
of Ecologically Relevant Species.**

Johnson SGB, Schotanus PR, Kelso JAS.
Ivan LN, Jones ML, Albers JL, Carvan MJ, Garcia-Reyero N, Nacci D,
Clark B, Klingler R, Murphy CA.

Trends Cogn Sci. 2024 Aug 9:S1364-6613(24)00174-8. doi:
10.1016/j.tics.2024.07.003. Online ahead of print.
Environ Toxicol Chem. 2024 Aug 22. doi: 10.1002/etc.5958. Online
ahead of print.

> We describe three ongoing research programs that strive toward
> these goals: (i) studying narratives as a cognitive and social
> representation used to guide decision-making; (ii) building
> cognitively informed agent-based models; and (iii) understanding
> markets …
> We tested the hypotheses that the well-known sublethal impacts of
> methylmercury (MeHg) and a polychlorinated biphenyl (PCB126) would
> have meaningful impacts on cohort growth and survival in yellow
> perch (Perca flavescens) and Atlantic killifish (Fundulus
> heteroclitus) populations …
5. **Breakdown of Boltzmann-type models for the alignment of
self-propelled rods.**
5. **Mating with Multi-Armed Bandits: Reinforcement Learning Models of
Human Mate Search.**

Murphy P, Perepelitsa M, Timofeyev I, Lieber-Kotz M, Islas B,
Igoshin OA.
Conroy-Beam D.

Math Biosci. 2024 Aug 8:109266. doi: 10.1016/j.mbs.2024.109266.
Online ahead of print.
Open Mind (Camb). 2024 Aug 15;8:995-1011. doi:
10.1162/opmi_a\_00156. eCollection 2024.

> We examine the accuracy of the kinetic model by comparing
> numerical solutions of the continuous equations to an agent-based
> model that implements the underlying rules governing microscopic
> alignment. …These results highlight the need to both develop …
> Moreover, using agent-based models and a sample of k = 522
> real-world romantic dyads, I show that a reciprocity-weighted
> Thompson sampling algorithm performs well both in guiding mate
> search in noisy search environments and in reproducing the mate
> choices of …
6. **Modeling the population health impact of accurate and inaccurate
perceptions of harm from nicotine.**
6. **Current limitations and opportunities for improvements of
agent-based transport models for noise exposure assessment.**

Hannel T, Wei L, Muhammad-Kah RS, Largo EG, Sarkar M.
Galassi Luquezi L, Le Bescond V, Aumond P, Gastineau P, Can A.

Harm Reduct J. 2024 Aug 9;21(1):145. doi:
10.1186/s12954-024-01059-x.
J Environ Manage. 2024 Aug 19;368:122129. doi:
10.1016/j.jenvman.2024.122129. Online ahead of print.

> We assessed the population health impact associated with nicotine
> perceptions. METHODS: Using a previously validated agent-based
> model to the U.S. population, we analyzed nationally
> representative data from the Population Assessment of Tobacco and
> Health (PAT …
> Agent-based models represent a promising approach for simulating
> transport systems and assessing their environmental noise impact,
> potentially enhancing standard noise exposure assessments.
> However, it is very important to understand the relevance of these
> as …
7. **Interacting particle models on the impact of spatially
heterogeneous human behavioral factors on dynamics of infectious
diseases.**
7. **A novel framework for crash frequency prediction: Geographic
support vector regression based on agent-based activity models in
Greater Melbourne.**

Xiong Y, Wang C, Zhang Y.
Duong Q, Gilbert H, Nguyen H.

PLoS Comput Biol. 2024 Aug 8;20(8):e1012345. doi:
10.1371/journal.pcbi.1012345. Online ahead of print.
Accid Anal Prev. 2024 Aug 19;207:107747. doi:
10.1016/j.aap.2024.107747. Online ahead of print.

> In order to understand how spatial characteristics like population
> mobility and clustering interplay with epidemic outbreaks, we
> formulate a stochastic-statistical environment-epidemic dynamic
> system (SEEDS) via an agent-based biased random walk model on a tw
> …
> This research introduces the Geographical Support Vector
> Regression (GSVR) framework, which incorporates generated distance
> matrices, to assess spatial variations and evaluate the influence
> of a wide range of factors, including traffic, infrastructure,
> socio-demographic, travel d …
8. **Simulation studies of social systems: telling the story based on
provenance patterns.**
8. **Wild salmon migration routes influence sea lice infestations: An
agent-based model predicting farm-related infestations on juvenile
salmon.**

Wilsdorf P, Reinhardt O, Prike T, Hinsch M, Bijak J, Uhrmacher AM.
Jeong J, McEwan G.

R Soc Open Sci. 2024 Aug 7;11(8):240258. doi: 10.1098/rsos.240258.
eCollection 2024 Aug.
PLoS One. 2024 Aug 20;19(8):e0309215. doi:
10.1371/journal.pone.0309215. eCollection 2024.

> In this paper, we refine the provenance pattern-based approach to
> address specific challenges of social agent-based simulation
> studies. Specifically, we focus on the activities and entities
> involved in collecting and analysing primary data about human
> decisions, and …
> This study presents an Agent-Based Model (ABM) simulation to
> assess the impact of varying migration routes on sea lice (Caligus
> clemensi) infestation levels in juvenile wild sockeye salmon
> (Oncorhynchus nerka) in the Discovery Islands, British Columbia,
> Canad …
9. **Semiparametric inference of effective reproduction number dynamics
from wastewater pathogen surveillance data.**
9. **Modeling the roles of cohesotaxis, cell-intercalation, and tissue
geometry in collective cell migration of Xenopus mesendoderm.**

Goldstein IH, Parker DM, Jiang S, Minin VM.
Comlekoglu T, Dzamba BJ, Pacheco GG, Shook DR, Sego TJ, Glazier JA,
Peirce SM, DeSimone DW.

Biometrics. 2024 Jul 1;80(3):ujae074. doi: 10.1093/biomtc/ujae074.
Biol Open. 2024 Aug 15;13(8):bio060615. doi: 10.1242/bio.060615.
Epub 2024 Aug 19.

> As a byproduct of our primary goal, we also produce a new model
> for estimating the effective reproduction number from case data
> using the same framework. We test this modeling framework in an
> agent-based simulation study with a realistic data generatin …
> Mesendoderm explants removed from embryos provide an
> experimentally tractable system for characterizing collective cell
> movements and behaviors, yet the cellular mechanisms responsible
> for this mode of migration remain elusive. We introduce a novel
> agent-based compu …
10. **Effects of Intervention Timing on Health-Related Fake News:
Simulation Study.**
10. **Machine learning for the identification of phase transitions in
interacting agent-based systems: A Desai-Zwanzig example.**

Gwon N, Jeong W, Kim JH, Oh KH, Jun JK.
Evangelou N, Giovanis DG, Kevrekidis GA, Pavliotis GA, Kevrekidis
IG.

JMIR Form Res. 2024 Aug 7;8:e48284. doi: 10.2196/48284.
Phys Rev E. 2024 Jul;110(1-1):014121. doi:
10.1103/PhysRevE.110.014121.

> METHODS: A simulation was conducted using the
> susceptible-infected-recovered (SIR) model, which is a
> representative model of the virus spread mechanism. …NetLogo, an
> agent-based model, was used as the analytical tool. RESULTS: Fake
> news lasted …
> Deriving closed-form analytical expressions for reduced-order
> models, and judiciously choosing the closures leading to them, has
> long been the strategy of choice for studying phase- and
> noise-induced transitions for agent-based models (ABMs). In this p
> …
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