Major updates for SMART HIV IG (#6)

* Updated fhircommon library with  new functions

* Updates, fixes and additions to indicators, including HIVIND21 and HIVIND2

* Fixed disaggregations, indictars and commons files

* Adds models, codesystems, and valuesets to the IG (#11)

* Updated logical models

* Updated Libraries measures

* Fix HIVConcepts and remove extraneous files

* final fixes dor tx_curr (#13)

* Up-to-date Logical Models and Terms (#15)

* Fix build issues with generated resources (#16)

* Fix build issues with logical models and add URLs for terminologies

* Add ActorDefinitions for all Personas in L2

* Switch to generated Questionnaires (#18)

* Update FSH resources to latest versions

* Updated IG configuration

* Update date of draft

* revised concepts and adjusted some indicators (#21)

* Final updates for first draft IG for WHO (#22)

* IG pointer update

* Add github action for validation w/o publishing for PRs

* Added all CQL Templates and updated existing files

* Updates to IG structure and narrative content

* Personas render update

* * File naming, gitignore, menu, and workflows fixes and other various fixes
---------

Co-authored-by: Patric Prado <[email protected]>
Co-authored-by: Ian <[email protected]>
Co-authored-by: abert namanya <[email protected]>
Co-authored-by: Mutesasira Moses <[email protected]>
Co-authored-by: Pprado23 <[email protected]>

.github/workflows/validate.yml

@@ -0,0 +1,30 @@
+name: Validate using the IG Publisher
+
+on:
+  # Triggers the workflow on pull request events
+  pull_request:
+
+  # Allows you to run this workflow manually from the Actions tab
+  workflow_dispatch:
+
+# A workflow run is made up of one or more jobs that can run sequentially or in parallel
+jobs:
+  validate:
+    # The type of runner that the job will run on
+    runs-on: ubuntu-latest
+
+    # Steps represent a sequence of tasks that will be executed as part of the job
+    steps:
+      # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it
+      - uses: actions/checkout@v2
+      - name: Update the image to the latest publisher
+        uses: docker://hl7fhir/ig-publisher-base:latest
+        with:
+          # Get the latest publisher - don't run the batch script but run the line directly
+          args: curl -L https://github.com/HL7/fhir-ig-publisher/releases/latest/download/publisher.jar -o ./input-cache/publisher.jar --create-dirs
+
+      - name: Run the IG publisher
+        uses: docker://hl7fhir/ig-publisher-base:latest
+        with:
+          # Run the publisher - don't run the batch script but run the line directly
+          args: java -Xms1g -Xmx7g -jar ./input-cache/publisher.jar publisher -ig .

.gitignore

@@ -48,4 +48,6 @@ tramp
 .\#*
 .swp
 
-bkp/*
+*bkp*
+
+.sdkmanrc

ig.ini

@@ -1,5 +1,5 @@
 [IG]
-ig = input/anc-cds.xml
+ig = fsh-generated/resources/ImplementationGuide-smart.who.int.hiv.json
 
 #template = #local-template
 template = who.template.root#current

input/_resources/exp-params.json

@@ -0,0 +1,8 @@
+{
+    "resourceType" : "Parameters",
+    "id" : "exp-params",
+    "parameter" : [{
+      "name" : "system-version",
+      "valueUri" : "http://snomed.info/sct|http://snomed.info/sct/900000000000207008"
+    }]
+  }