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WrightonLabCSU

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  1. DRAM DRAM Public

    Distilled and Refined Annotation of Metabolism: A tool for the annotation and curation of function for microbial and viral genomes

    Python 255 52

  2. join_asvbins join_asvbins Public

    Python 2

  3. columbia_river columbia_river Public

    GitHub Repository of code used for the publication titled: Genome-resolved metaproteomics decodes the microbial and viral contributions to coupled carbon and nitrogen cycling in river sediments

    Python 1

  4. JGI-API-Request JGI-API-Request Public

    Python script is designed to fetch and process genomic data from the Joint Genome Institute (JGI) API, allowing users to request file downloads programmatically based on given taxon IDs.

    Python 3 1

Repositories

Showing 10 of 14 repositories
  • catechin_incubations Public
    WrightonLabCSU/catechin_incubations’s past year of commit activity
    R 0 GPL-3.0 0 0 0 Updated Nov 7, 2024
  • DRAM Public

    Distilled and Refined Annotation of Metabolism: A tool for the annotation and curation of function for microbial and viral genomes

    WrightonLabCSU/DRAM’s past year of commit activity
    Python 255 GPL-3.0 52 104 (2 issues need help) 1 Updated Nov 5, 2024
  • dram-viz Public

    A library for visualizing the output of DRAM2

    WrightonLabCSU/dram-viz’s past year of commit activity
    Python 1 0 2 0 Updated Oct 3, 2024
  • JGI-API-Request Public

    Python script is designed to fetch and process genomic data from the Joint Genome Institute (JGI) API, allowing users to request file downloads programmatically based on given taxon IDs.

    WrightonLabCSU/JGI-API-Request’s past year of commit activity
    Python 3 1 0 0 Updated Jul 2, 2024
  • Protpipeliner Public

    This script combines MUSCLE, GBLOCKS, Prottest and RaxML for an efficient and streamlined method of building trees.

    WrightonLabCSU/Protpipeliner’s past year of commit activity
    Python 1 0 0 0 Updated May 14, 2024
  • CAMPER Public

    This is a repository for CAMPER.

    WrightonLabCSU/CAMPER’s past year of commit activity
    Python 11 GPL-3.0 0 2 0 Updated Mar 18, 2024
  • stordalen_polyphenols_paper Public
    WrightonLabCSU/stordalen_polyphenols_paper’s past year of commit activity
    HTML 0 0 0 0 Updated Feb 23, 2024
  • AD_CERC Public
    WrightonLabCSU/AD_CERC’s past year of commit activity
    0 0 0 0 Updated Sep 19, 2023
  • kb_DRAM Public

    A Kbase app for DRAM

    WrightonLabCSU/kb_DRAM’s past year of commit activity
    Python 1 MIT 1 3 0 Updated Jun 24, 2023
  • prodigal-recoding Public Forked from hyattpd/Prodigal

    Fork of Prodigal Gene Prediction Software to introduce recoding of stop codons

    WrightonLabCSU/prodigal-recoding’s past year of commit activity
    C 1 GPL-3.0 87 0 0 Updated Apr 1, 2023
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