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SPAdes single-cell datasets tests

Scaffolding fix #18

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Scaffolding fix

Scaffolding fix #18

Triggered via push April 16, 2024 17:41
@ItolstoganovItolstoganov
pushed c75a075
cloudspades-0.1
Status Failure
Total duration 2h 18m 25s
Artifacts 1

single_cell.yml

on: push
🚧 Build SPAdes
3m 53s
🚧 Build SPAdes
Single-cell E.coli deeptrench
1m 34s
Single-cell E.coli deeptrench
Single-cell E.coli JGI lane 7
3m 27s
Single-cell E.coli JGI lane 7
Single-cell E.coli JGI lane 7 2 libraries
6m 18s
Single-cell E.coli JGI lane 7 2 libraries
Single-cell+contigs E.coli UCSD lane 1
9m 9s
Single-cell+contigs E.coli UCSD lane 1
Single-cell P.heparinus JGI lane 7
8m 15s
Single-cell P.heparinus JGI lane 7
Single-cell M.ruber JGI lane 9
7m 48s
Single-cell M.ruber JGI lane 9
Single-cell P.marinus
6m 29s
Single-cell P.marinus
Single-cell+PacBio TM6
8m 9s
Single-cell+PacBio TM6
Single-cell single-end P.marinus
4m 56s
Single-cell single-end P.marinus
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Annotations

9 errors and 10 warnings
Single-cell E.coli deeptrench
Process completed with exit code 8.
Single-cell E.coli JGI lane 7
Process completed with exit code 8.
Single-cell E.coli JGI lane 7 2 libraries
Process completed with exit code 8.
Single-cell M.ruber JGI lane 9
Process completed with exit code 8.
Single-cell+contigs E.coli UCSD lane 1
Process completed with exit code 8.
Single-cell+PacBio TM6
Process completed with exit code 8.
Single-cell P.heparinus JGI lane 7
Process completed with exit code 8.
Single-cell single-end P.marinus
Process completed with exit code 8.
Single-cell P.marinus
Process completed with exit code 8.
🚧 Build SPAdes
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/upload-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Single-cell E.coli deeptrench
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/download-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Single-cell E.coli JGI lane 7
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/download-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Single-cell E.coli JGI lane 7 2 libraries
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/download-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Single-cell M.ruber JGI lane 9
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/download-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Single-cell+contigs E.coli UCSD lane 1
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/download-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Single-cell+PacBio TM6
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/download-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Single-cell P.heparinus JGI lane 7
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/download-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Single-cell single-end P.marinus
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/download-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Single-cell P.marinus
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/download-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Artifacts

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build-artifacts Expired
15.5 MB