Merge branch 'devel' of git.bioconductor.org:packages/snifter into devel #113
alanocallaghan
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5 errors and 26 warnings
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windows-latest (devel - )
--- re-building 'snifter.Rmd' using rmarkdown
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windows-latest (devel - )
processing vignette 'snifter.Rmd' failed with diagnostics:
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windows-latest (devel - )
Vignette re-building failed.
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windows-latest (devel - )
Build process failed
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windows-latest (devel - )
Process completed with exit code 1.
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r-lib/actions/setup-r-dependencies@v1 is deprecated.
r-lib/actions/setup-r-dependencies@v1 is deprecated. Please update your workflow to use the 'v2' version. Also look at the examples at https://github.com/r-lib/actions/tree/v2/examples because 'v2' workflows are much simpler than 'v1' workflows.
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windows-latest (devel - )
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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windows-latest (devel - )
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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r-lib/actions/check-r-package@v1 is deprecated.
r-lib/actions/check-r-package@v1 is deprecated. Please update your workflow to use the 'v2' version. Also look at the examples at https://github.com/r-lib/actions/tree/v2/examples because 'v2' workflows are much simpler than 'v1' workflows.
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r-lib/actions/setup-r-dependencies@v1 is deprecated.
r-lib/actions/setup-r-dependencies@v1 is deprecated. Please update your workflow to use the 'v2' version. Also look at the examples at https://github.com/r-lib/actions/tree/v2/examples because 'v2' workflows are much simpler than 'v1' workflows.
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ubuntu-latest (release - )
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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ubuntu-latest (release - )
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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r-lib/actions/check-r-package@v1 is deprecated.
r-lib/actions/check-r-package@v1 is deprecated. Please update your workflow to use the 'v2' version. Also look at the examples at https://github.com/r-lib/actions/tree/v2/examples because 'v2' workflows are much simpler than 'v1' workflows.
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r-lib/actions/setup-r-dependencies@v1 is deprecated.
r-lib/actions/setup-r-dependencies@v1 is deprecated. Please update your workflow to use the 'v2' version. Also look at the examples at https://github.com/r-lib/actions/tree/v2/examples because 'v2' workflows are much simpler than 'v1' workflows.
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windows-latest (release - )
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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windows-latest (release - )
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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r-lib/actions/check-r-package@v1 is deprecated.
r-lib/actions/check-r-package@v1 is deprecated. Please update your workflow to use the 'v2' version. Also look at the examples at https://github.com/r-lib/actions/tree/v2/examples because 'v2' workflows are much simpler than 'v1' workflows.
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windows-latest (release - )
file 'snifter/configure' did not have execute permissions: corrected
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r-lib/actions/setup-r-dependencies@v1 is deprecated.
r-lib/actions/setup-r-dependencies@v1 is deprecated. Please update your workflow to use the 'v2' version. Also look at the examples at https://github.com/r-lib/actions/tree/v2/examples because 'v2' workflows are much simpler than 'v1' workflows.
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ubuntu-latest (devel - )
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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ubuntu-latest (devel - )
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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r-lib/actions/check-r-package@v1 is deprecated.
r-lib/actions/check-r-package@v1 is deprecated. Please update your workflow to use the 'v2' version. Also look at the examples at https://github.com/r-lib/actions/tree/v2/examples because 'v2' workflows are much simpler than 'v1' workflows.
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macOS-latest (devel - )
unable to access index for repository https://www.bioconductor.org/packages/3.18/data/annotation/bin/macosx/big-sur-x86_64/contrib/4.3:
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r-lib/actions/setup-r-dependencies@v1 is deprecated.
r-lib/actions/setup-r-dependencies@v1 is deprecated. Please update your workflow to use the 'v2' version. Also look at the examples at https://github.com/r-lib/actions/tree/v2/examples because 'v2' workflows are much simpler than 'v1' workflows.
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macOS-latest (devel - )
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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macOS-latest (devel - )
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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r-lib/actions/check-r-package@v1 is deprecated.
r-lib/actions/check-r-package@v1 is deprecated. Please update your workflow to use the 'v2' version. Also look at the examples at https://github.com/r-lib/actions/tree/v2/examples because 'v2' workflows are much simpler than 'v1' workflows.
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r-lib/actions/setup-r-dependencies@v1 is deprecated.
r-lib/actions/setup-r-dependencies@v1 is deprecated. Please update your workflow to use the 'v2' version. Also look at the examples at https://github.com/r-lib/actions/tree/v2/examples because 'v2' workflows are much simpler than 'v1' workflows.
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macOS-latest (release - )
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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macOS-latest (release - )
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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r-lib/actions/check-r-package@v1 is deprecated.
r-lib/actions/check-r-package@v1 is deprecated. Please update your workflow to use the 'v2' version. Also look at the examples at https://github.com/r-lib/actions/tree/v2/examples because 'v2' workflows are much simpler than 'v1' workflows.
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