Added 258 sequences from San Diego #89
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| name: Make fasta file | |
| on: | |
| push: | |
| branches: | |
| - master | |
| jobs: | |
| make_fasta: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Set up Git repository | |
| uses: actions/checkout@v2 | |
| - name: Concatenate consensus sequences | |
| run: find consensus_sequences -type f -name '*.fasta' | xargs cat | gzip -9 > consensus_sequences.fasta.gz | |
| - name: Generate release tag | |
| id: tag | |
| run: | | |
| echo "::set-output name=release_tag::SequenceUpload_$(date +"%Y.%m.%d_%H-%M")" | |
| - name: Publish release | |
| uses: softprops/action-gh-release@v1 | |
| with: | |
| tag_name: ${{ steps.tag.outputs.release_tag }} | |
| files: consensus_sequences.fasta.gz | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} |