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autoreject · Nov 27, 2023 · 880276f · 880276f
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diff --git a/dev/.buildinfo b/dev/.buildinfo
@@ -1,4 +1,4 @@
 # Sphinx build info version 1
 # This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
-config: be500588654c21b1241230d680a456c6
+config: 1faadc2bb233d0af39db30882010dd11
 tags: 645f666f9bcd5a90fca523b33c5a78b7
diff --git a/dev/_downloads/07fcc19ba03226cd3d83d4e40ec44385/auto_examples_python.zip b/dev/_downloads/07fcc19ba03226cd3d83d4e40ec44385/auto_examples_python.zip
diff --git a/dev/_downloads/343ec55e666b7130c35f6a4de928c39a/plot_visualize_bad_epochs.py b/dev/_downloads/343ec55e666b7130c35f6a4de928c39a/plot_visualize_bad_epochs.py
@@ -63,7 +63,7 @@
                              consecutive='increasing',
                              min_duration=0.003, verbose=True)
     # Read epochs
-    mne.io.set_eeg_reference(raw)
+    mne.set_eeg_reference(raw)
 
     epoch = mne.Epochs(raw, events, events_id, tmin, tmax, proj=True,
                        baseline=None,

diff --git a/dev/_downloads/6f1e7a639e0699d6164445b55e6c116d/auto_examples_jupyter.zip b/dev/_downloads/6f1e7a639e0699d6164445b55e6c116d/auto_examples_jupyter.zip
diff --git a/dev/_downloads/9d3e69826a86abb695c16aa2b83fb4a2/plot_visualize_bad_epochs.ipynb b/dev/_downloads/9d3e69826a86abb695c16aa2b83fb4a2/plot_visualize_bad_epochs.ipynb
@@ -69,7 +69,7 @@
       },
       "outputs": [],
       "source": [
-        "import mne  # noqa\n\nepochs = list()\nfor run in range(3, 7):\n    run_fname = os.path.join(target_dir, f'sub-{subject_id}', 'ses-meg', 'meg',\n                             f'sub-{subject_id}_ses-meg_task-facerecognition'\n                             '_run-{:02d}_meg.fif'.format(run))\n    raw = mne.io.read_raw_fif(run_fname, preload=True)\n    raw.pick_types(eeg=True, meg=False, stim=True)  # less memory + computation\n    raw.filter(1., 40., l_trans_bandwidth=0.5, n_jobs=1, verbose='INFO')\n\n    raw.set_channel_types({'EEG061': 'eog', 'EEG062': 'eog',\n                           'EEG063': 'ecg', 'EEG064': 'misc'})\n    raw.rename_channels({'EEG061': 'EOG061', 'EEG062': 'EOG062',\n                         'EEG063': 'ECG063', 'EEG064': 'MISC'})\n\n    events = mne.find_events(raw, stim_channel='STI101',\n                             consecutive='increasing',\n                             min_duration=0.003, verbose=True)\n    # Read epochs\n    mne.io.set_eeg_reference(raw)\n\n    epoch = mne.Epochs(raw, events, events_id, tmin, tmax, proj=True,\n                       baseline=None,\n                       preload=False, reject=None, decim=4)\n    epochs.append(epoch)\n\n    # Same `dev_head_t` for all runs so that we can concatenate them.\n    epoch.info['dev_head_t'] = epochs[0].info['dev_head_t']\n\n\nepochs = mne.epochs.concatenate_epochs(epochs)"
+        "import mne  # noqa\n\nepochs = list()\nfor run in range(3, 7):\n    run_fname = os.path.join(target_dir, f'sub-{subject_id}', 'ses-meg', 'meg',\n                             f'sub-{subject_id}_ses-meg_task-facerecognition'\n                             '_run-{:02d}_meg.fif'.format(run))\n    raw = mne.io.read_raw_fif(run_fname, preload=True)\n    raw.pick_types(eeg=True, meg=False, stim=True)  # less memory + computation\n    raw.filter(1., 40., l_trans_bandwidth=0.5, n_jobs=1, verbose='INFO')\n\n    raw.set_channel_types({'EEG061': 'eog', 'EEG062': 'eog',\n                           'EEG063': 'ecg', 'EEG064': 'misc'})\n    raw.rename_channels({'EEG061': 'EOG061', 'EEG062': 'EOG062',\n                         'EEG063': 'ECG063', 'EEG064': 'MISC'})\n\n    events = mne.find_events(raw, stim_channel='STI101',\n                             consecutive='increasing',\n                             min_duration=0.003, verbose=True)\n    # Read epochs\n    mne.set_eeg_reference(raw)\n\n    epoch = mne.Epochs(raw, events, events_id, tmin, tmax, proj=True,\n                       baseline=None,\n                       preload=False, reject=None, decim=4)\n    epochs.append(epoch)\n\n    # Same `dev_head_t` for all runs so that we can concatenate them.\n    epoch.info['dev_head_t'] = epochs[0].info['dev_head_t']\n\n\nepochs = mne.epochs.concatenate_epochs(epochs)"
       ]
     },
     {

diff --git a/dev/_images/sphx_glr_plot_auto_repair_001.png b/dev/_images/sphx_glr_plot_auto_repair_001.png
diff --git a/dev/_images/sphx_glr_plot_auto_repair_002.png b/dev/_images/sphx_glr_plot_auto_repair_002.png
diff --git a/dev/_images/sphx_glr_plot_auto_repair_thumb.png b/dev/_images/sphx_glr_plot_auto_repair_thumb.png
diff --git a/dev/_images/sphx_glr_plot_autoreject_workflow_001.png b/dev/_images/sphx_glr_plot_autoreject_workflow_001.png
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diff --git a/dev/_images/sphx_glr_plot_autoreject_workflow_004.png b/dev/_images/sphx_glr_plot_autoreject_workflow_004.png
diff --git a/dev/_images/sphx_glr_plot_autoreject_workflow_005.png b/dev/_images/sphx_glr_plot_autoreject_workflow_005.png
diff --git a/dev/_images/sphx_glr_plot_autoreject_workflow_006.png b/dev/_images/sphx_glr_plot_autoreject_workflow_006.png
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diff --git a/dev/_images/sphx_glr_plot_autoreject_workflow_010.png b/dev/_images/sphx_glr_plot_autoreject_workflow_010.png
diff --git a/dev/_images/sphx_glr_plot_channel_thresholds_001.png b/dev/_images/sphx_glr_plot_channel_thresholds_001.png
diff --git a/dev/_images/sphx_glr_plot_estimate_global_reject_001.png b/dev/_images/sphx_glr_plot_estimate_global_reject_001.png
diff --git a/dev/_images/sphx_glr_plot_estimate_global_reject_thumb.png b/dev/_images/sphx_glr_plot_estimate_global_reject_thumb.png
diff --git a/dev/_images/sphx_glr_plot_global_reject_001.png b/dev/_images/sphx_glr_plot_global_reject_001.png
diff --git a/dev/_images/sphx_glr_plot_ransac_001.png b/dev/_images/sphx_glr_plot_ransac_001.png
diff --git a/dev/_images/sphx_glr_plot_ransac_002.png b/dev/_images/sphx_glr_plot_ransac_002.png
diff --git a/dev/_images/sphx_glr_plot_ransac_thumb.png b/dev/_images/sphx_glr_plot_ransac_thumb.png
diff --git a/dev/_images/sphx_glr_plot_visualize_bad_epochs_001.png b/dev/_images/sphx_glr_plot_visualize_bad_epochs_001.png
diff --git a/dev/_images/sphx_glr_plot_visualize_bad_epochs_002.png b/dev/_images/sphx_glr_plot_visualize_bad_epochs_002.png
diff --git a/dev/_images/sphx_glr_plot_visualize_bad_epochs_003.png b/dev/_images/sphx_glr_plot_visualize_bad_epochs_003.png
diff --git a/dev/_images/sphx_glr_plot_visualize_bad_epochs_004.png b/dev/_images/sphx_glr_plot_visualize_bad_epochs_004.png
diff --git a/dev/_images/sphx_glr_plot_visualize_bad_epochs_005.png b/dev/_images/sphx_glr_plot_visualize_bad_epochs_005.png
diff --git a/dev/_images/sphx_glr_plot_visualize_bad_epochs_006.png b/dev/_images/sphx_glr_plot_visualize_bad_epochs_006.png
diff --git a/dev/_modules/autoreject/autoreject.html b/dev/_modules/autoreject/autoreject.html
@@ -2,7 +2,7 @@
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-<html lang="en" data-theme="auto">
+<html lang="en" data-content_root="../../" data-theme="auto">
 
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@@ -17,12 +17,12 @@
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+  <link href="../../_static/styles/theme.css?digest=5b4479735964841361fd" rel="stylesheet" />
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+  <link rel="preload" as="script" href="../../_static/scripts/bootstrap.js?digest=5b4479735964841361fd" />
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@@ -47,7 +47,7 @@
     <script src="../../_static/copybutton.js?v=fd10adb8"></script>
     <script>DOCUMENTATION_OPTIONS.pagename = '_modules/autoreject/autoreject';</script>
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-        DOCUMENTATION_OPTIONS.theme_version = '0.14.3';
+        DOCUMENTATION_OPTIONS.theme_version = '0.14.4';
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@@ -122,6 +122,7 @@
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+
 
 
 <a class="navbar-brand logo" href="../../index.html">
@@ -141,7 +142,8 @@
 
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-        <div class="navbar-item"><nav class="navbar-nav">
+        <div class="navbar-item">
+<nav class="navbar-nav">
   <p class="sidebar-header-items__title"
      role="heading"
      aria-level="1"
@@ -194,6 +196,7 @@
 
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+
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@@ -207,6 +210,7 @@
 
 
         <div class="navbar-item">
+
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@@ -263,6 +267,7 @@
 
 
     <div class="navbar-persistent--mobile">
+
  <script>
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@@ -292,7 +297,8 @@
 
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-          <div class="navbar-item"><nav class="navbar-nav">
+          <div class="navbar-item">
+<nav class="navbar-nav">
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+
 <script>
 document.write(`
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@@ -1963,7 +1970,7 @@ <h1>Source code for autoreject.autoreject</h1><div class="highlight"><pre>
 
 
                 <footer class="prev-next-footer">
-                  <!-- Previous / next buttons -->
+
 <div class="prev-next-area">
 </div>
                 </footer>
@@ -1983,24 +1990,26 @@ <h1>Source code for autoreject.autoreject</h1><div class="highlight"><pre>
   </div>
 
   <!-- Scripts loaded after <body> so the DOM is not blocked -->
-  <script src="../../_static/scripts/bootstrap.js?digest=365ca57ee442770a23c6"></script>
-<script src="../../_static/scripts/pydata-sphinx-theme.js?digest=365ca57ee442770a23c6"></script>
+  <script src="../../_static/scripts/bootstrap.js?digest=5b4479735964841361fd"></script>
+<script src="../../_static/scripts/pydata-sphinx-theme.js?digest=5b4479735964841361fd"></script>
 
   <footer class="bd-footer">
 <div class="bd-footer__inner bd-page-width">
 
     <div class="footer-items__start">
 
         <div class="footer-item">
+
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-      © Copyright 2016-2023, autoreject developers. Last updated on 2023-11-14.
+      © Copyright 2016-2023, autoreject developers. Last updated on 2023-11-27.
       <br/>
 
   </p>
 </div>
 
         <div class="footer-item">
+
   <p class="sphinx-version">
     Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 7.2.6.
     <br/>
@@ -2013,8 +2022,9 @@ <h1>Source code for autoreject.autoreject</h1><div class="highlight"><pre>
 
     <div class="footer-items__end">
 
-        <div class="footer-item"><p class="theme-version">
-  Built with the <a href="https://pydata-sphinx-theme.readthedocs.io/en/stable/index.html">PyData Sphinx Theme</a> 0.14.3.
+        <div class="footer-item">
+<p class="theme-version">
+  Built with the <a href="https://pydata-sphinx-theme.readthedocs.io/en/stable/index.html">PyData Sphinx Theme</a> 0.14.4.
 </p></div>
 
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diff --git a/dev/_modules/autoreject/ransac.html b/dev/_modules/autoreject/ransac.html
@@ -2,7 +2,7 @@
 <!DOCTYPE html>
 
 
-<html lang="en" data-theme="auto">
+<html lang="en" data-content_root="../../" data-theme="auto">
 
   <head>
     <meta charset="utf-8" />
@@ -17,12 +17,12 @@
   </script>
 
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-<link href="../../_static/styles/pydata-sphinx-theme.css?digest=365ca57ee442770a23c6" rel="stylesheet" />
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     <script>DOCUMENTATION_OPTIONS.pagename = '_modules/autoreject/ransac';</script>
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+
 
 
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-        <div class="navbar-item"><nav class="navbar-nav">
+        <div class="navbar-item">
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+
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@@ -715,7 +722,7 @@ <h1>Source code for autoreject.ransac</h1><div class="highlight"><pre>
 
 
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-                  <!-- Previous / next buttons -->
+
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@@ -735,24 +742,26 @@ <h1>Source code for autoreject.ransac</h1><div class="highlight"><pre>
   </div>
 
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+
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+      © Copyright 2016-2023, autoreject developers. Last updated on 2023-11-27.
       <br/>
 
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 </div>
 
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+
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     Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 7.2.6.
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@@ -765,8 +774,9 @@ <h1>Source code for autoreject.ransac</h1><div class="highlight"><pre>
 
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-  Built with the <a href="https://pydata-sphinx-theme.readthedocs.io/en/stable/index.html">PyData Sphinx Theme</a> 0.14.3.
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