Rearrange file hierarchy and move to beekit #425
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This is a substantial rearrangement of the repository, but mainly consists of files moves.
There were a large number of files used by each of the different targets. This moves these files
to the shared BeeKit library so they only need to be built once. This is less confusing (to me)
and may also help to reduce build times.
For the remaining top level app files also arrange into a number of subdirectories.
Filesystem structure is also updated to match the XCode structure, and things in XCode are
alphabetized to reduce the likelihood of merge conflicts in future changes which introduce files.
Testing:
Confirmed it builds