template 3.1.0 update

bigbio · Dec 20, 2024 · 5a70360 · 5a70360
1 parent 6ed3398
commit 5a70360
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Showing 3 changed files with 4 additions and 4 deletions.
diff --git a/conf/modules.config b/conf/modules.config
@@ -20,15 +20,15 @@ process {
 
     // Local Subworkflows
     // INPUT_CHECK
-    withName: 'NFCORE_QUANTMS:QUANTMS:INPUT_CHECK:SAMPLESHEET_CHECK' {
+    withName: 'BIGBIO_QUANTMS:QUANTMS:INPUT_CHECK:SAMPLESHEET_CHECK' {
         publishDir = [
             path: { "${params.outdir}/pipeline_info" },
             mode: 'copy',
             saveAs: { filename -> filename.equals('versions.yml') ? null : filename }
         ]
     }
 
-    withName: 'NFCORE_QUANTMS:QUANTMS:CUSTOM_DUMPSOFTWAREVERSIONS' {
+    withName: 'BIGBIO_QUANTMS:QUANTMS:CUSTOM_DUMPSOFTWAREVERSIONS' {
         publishDir = [
             path: { "${params.outdir}/pipeline_info" },
             mode: params.publish_dir_mode,

diff --git a/conf/test_dia.config b/conf/test_dia.config
@@ -42,7 +42,7 @@ params {
 
 process {
     // thermorawfileparser
-    withName: 'NFCORE_QUANTMS:QUANTMS:FILE_PREPARATION:THERMORAWFILEPARSER' {
+    withName: 'BIGBIO_QUANTMS:QUANTMS:FILE_PREPARATION:THERMORAWFILEPARSER' {
         publishDir  = [path: { "${params.outdir}/${task.process.tokenize(':')[-1].toLowerCase()}" }, pattern: "*.log" ]
     }
 }
diff --git a/conf/test_latest_dia.config b/conf/test_latest_dia.config
@@ -35,7 +35,7 @@ params {
 
 process {
     // thermorawfileparser
-    withName: 'NFCORE_QUANTMS:QUANTMS:FILE_PREPARATION:THERMORAWFILEPARSER' {
+    withName: 'BIGBIO_QUANTMS:QUANTMS:FILE_PREPARATION:THERMORAWFILEPARSER' {
         publishDir  = [path: { "${params.outdir}/${task.process.tokenize(':')[-1].toLowerCase()}" }, pattern: "*.log" ]
     }