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added test correction tmtplex
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ypriverol committed Oct 4, 2024
1 parent 1e5794f commit dbf7cd5
Showing 1 changed file with 2 additions and 1 deletion.
3 changes: 2 additions & 1 deletion modules/local/openms/isobaricanalyzer/main.nf
Original file line number Diff line number Diff line change
Expand Up @@ -42,7 +42,8 @@ process ISOBARICANALYZER {
def values = line.split('/')
return "${values[1]}/${values[2]}/${values[3]}/${values[4]}"
}
isotope_correction += " -${meta.labelling_type}:correction_matrix ${matrix_lines.join(', ')}"
def correction_matrix = matrix_lines.join(", ")
isotope_correction += " -${meta.labelling_type}:correction_matrix \"${correction_matrix}\""
}

"""
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