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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,105 @@ | ||
| <script setup lang="ts"> | ||
| /** The component for the Acmg Criteria Card. */ | ||
| import { | ||
| Presence, | ||
| StateSource, | ||
| AcmgCriteria, | ||
| type CriteriaState, | ||
| AcmgEvidenceLevel, | ||
| ACMG_CRITERIA_DEFS, | ||
| ACMG_EVIDENCE_LEVELS_PATHOGENIC, | ||
| ACMG_EVIDENCE_LEVELS_BENIGN | ||
| } from '@/lib/acmgSeqVar' | ||
| interface Props { | ||
| /** The acmg rating. */ | ||
| acmgRating: any | ||
| /** The acmg criteria. */ | ||
| criteria: AcmgCriteria | ||
| /** The acmg criteria state. */ | ||
| criteriaState: CriteriaState | ||
| } | ||
| const props = withDefaults(defineProps<Props>(), { | ||
| acmgRating: undefined, | ||
| criteria: undefined, | ||
| criteriaState: undefined | ||
| }) | ||
| const findSwitchColor = (): string => { | ||
| const evidence = props.criteriaState.evidenceLevel | ||
| if (evidence === AcmgEvidenceLevel.PathogenicVeryStrong) { | ||
| return 'red-accent-4' | ||
| } else if (evidence === AcmgEvidenceLevel.PathogenicStrong) { | ||
| return 'orange-darken-4' | ||
| } else if (evidence === AcmgEvidenceLevel.PathogenicModerate) { | ||
| return 'amber-darken-4' | ||
| } else if (evidence === AcmgEvidenceLevel.PathogenicSupporting) { | ||
| return 'yellow-darken-3' | ||
| } else if (evidence === AcmgEvidenceLevel.BenignStandalone) { | ||
| return 'green-darken-4' | ||
| } else if (evidence === AcmgEvidenceLevel.BenignStrong) { | ||
| return 'light-green' | ||
| } else if (evidence === AcmgEvidenceLevel.BenignSupporting) { | ||
| return 'lime' | ||
| } else { | ||
| return 'primary' | ||
| } | ||
| } | ||
| const switchCriteria = (criteria: AcmgCriteria, presence: Presence) => { | ||
| if (presence === Presence.Present) { | ||
| props.acmgRating.setPresence(StateSource.User, criteria, Presence.Absent) | ||
| } else { | ||
| props.acmgRating.setPresence(StateSource.User, criteria, Presence.Present) | ||
| } | ||
| } | ||
| </script> | ||
|
|
||
| <template> | ||
| <v-card class="mx-auto compact-form" width="150" style="margin: 10px"> | ||
| <div class="d-flex justify-content-between"> | ||
| <v-switch | ||
| :color="findSwitchColor()" | ||
| :label="props.criteria" | ||
| :model-value="props.criteriaState.presence === Presence.Present" | ||
| @update:model-value="switchCriteria(props.criteria, props.criteriaState.presence)" | ||
| hide-details="auto" | ||
| density="compact" | ||
| class="switch" | ||
| /> | ||
| <v-tooltip :text="ACMG_CRITERIA_DEFS.get(props.criteria)?.hint"> | ||
| <template v-slot:activator="{ props }"> | ||
| <v-icon style="margin: 10px" v-bind="props">mdi-information</v-icon> | ||
| </template> | ||
| </v-tooltip> | ||
| </div> | ||
| <v-select | ||
| :model-value="props.criteriaState.evidenceLevel" | ||
| @update:model-value="props.acmgRating.setEvidenceLevel(StateSource.User, criteria, $event)" | ||
| :items=" | ||
| ACMG_EVIDENCE_LEVELS_PATHOGENIC.includes(props.criteriaState.evidenceLevel) | ||
| ? ACMG_EVIDENCE_LEVELS_PATHOGENIC | ||
| : ACMG_EVIDENCE_LEVELS_BENIGN | ||
| " | ||
| hide-details="auto" | ||
| density="compact" | ||
| class="select" | ||
| /> | ||
| </v-card> | ||
| </template> | ||
|
|
||
| <style scoped> | ||
| .switch { | ||
| margin-left: 10px; | ||
| padding: 0px; | ||
| } | ||
| .select { | ||
| margin: 0px; | ||
| } | ||
| .compact-form { | ||
| transform: scale(0.9); | ||
| transform-origin: left; | ||
| } | ||
| </style> |
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67 changes: 67 additions & 0 deletions
67
frontend/src/components/__tests__/AcmgCriteriaCard.spec.ts
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,67 @@ | ||
| import { describe, expect, it, vi } from 'vitest' | ||
| import { mount } from '@vue/test-utils' | ||
| import { createRouter, createWebHistory } from 'vue-router' | ||
| import { routes } from '@/router' | ||
|
|
||
| import { createVuetify } from 'vuetify' | ||
| import * as components from 'vuetify/components' | ||
| import * as directives from 'vuetify/directives' | ||
|
|
||
| import { MultiSourceAcmgCriteriaState, StateSource, AcmgCriteria, Presence } from '@/lib/acmgSeqVar' | ||
| import AcmgCriteriaCard from '@/components/AcmgCriteriaCard.vue' | ||
|
|
||
| const vuetify = createVuetify({ | ||
| components, | ||
| directives | ||
| }) | ||
|
|
||
| const router = createRouter({ | ||
| history: createWebHistory(import.meta.env.BASE_URL), | ||
| routes: routes | ||
| }) | ||
| // Mock router push | ||
| router.push = vi.fn() | ||
|
|
||
| const makeWrapper = () => { | ||
| const acmgRating = new MultiSourceAcmgCriteriaState() | ||
| acmgRating.setPresence(StateSource.InterVar, AcmgCriteria.Pvs1, Presence.Present) | ||
| const criteria = AcmgCriteria.Pvs1 | ||
| const criteriaState = acmgRating.getCriteriaState(criteria) | ||
|
|
||
| return mount(AcmgCriteriaCard, { | ||
| props: { | ||
| acmgRating: acmgRating, | ||
| criteria: criteria, | ||
| criteriaState: criteriaState | ||
| }, | ||
| global: { | ||
| plugins: [vuetify, router], | ||
| components: { | ||
| AcmgCriteriaCard | ||
| } | ||
| } | ||
| }) | ||
| } | ||
|
|
||
| describe.concurrent('AcmgCriteriaCard', async () => { | ||
| it('renders the AcmgRating info', async () => { | ||
| const wrapper = makeWrapper() | ||
| expect(wrapper.text()).toContain('Pathogenic') | ||
| expect(wrapper.text()).toContain('Pvs1') | ||
|
|
||
| const switcher = wrapper.find('.v-switch') | ||
| expect(switcher.text()).toContain('Pvs1') | ||
|
|
||
| const selection = wrapper.find('.v-select') | ||
| expect(selection.text()).toContain('Pathogenic') | ||
| }) | ||
|
|
||
| it('should correctly update the AcmgCriteriaCard info', async () => { | ||
| const wrapper = makeWrapper() | ||
| const switcher = wrapper.find('.v-switch') | ||
| await switcher.trigger('click') | ||
|
|
||
| const selection = wrapper.find('.v-select') | ||
| await selection.trigger('click') | ||
| }) | ||
| }) |