feat: integration of meahri 0.8.0 (#56)

[holtgrewe]

This provides access to all affected genes in a SV. Note that this also changes keys from kebab-case to snake_case.

[holtgrewe]

@gromdimon this is needed after mehari docker image 0.8.0 has been pushed to ghcr.io and is marked as latest (don't forget to docker compose pull). This changes the keys in mehari REST URIs to snake_case. Also, it provides

• http://mehari:8080/strucvars/csq?genome_release=grch37&chromosome=17&start=48275360&&stop=48275370&sv_type=DEL

CC @xiamaz regarding the new mehari feature. NB that it also renames /tx/csq to /seqvars/csq.

[codecov]

Codecov Report

Merging #103 (27ade2b) into main (85275d9) will increase coverage by 5.89%.
The diff coverage is n/a.

Additional details and impacted files

@@            Coverage Diff             @@
##             main     #103      +/-   ##
==========================================
+ Coverage   80.71%   86.60%   +5.89%     
==========================================
  Files          85       32      -53     
  Lines        2318      463    -1855     
  Branches      555        0     -555     
==========================================
- Hits         1871      401    -1470     
+ Misses        419       62     -357     
+ Partials       28        0      -28     

see 53 files with indirect coverage changes