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Feature/lsm #24

Merged
merged 2 commits into from
Nov 13, 2024
Merged

Feature/lsm #24

merged 2 commits into from
Nov 13, 2024

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jboulanger
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This pull request resolves #23

Description of Changes

Add LSM as a file supported by the tiffreader.

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@evamaxfield evamaxfield left a comment

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Fine with me!

Meta note: tifffile can indeed read a lot more than these three, @toloudis @SeanLeRoy should we add the rest in another PR?

@jboulanger
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There might be extra work to do to make it work. Using the series in the reader is currently not loading properly multi position files for example. You could choose to have a reader per sub-type of tif file that uses tifffile but it would be quite a lot of work when tifffile exposes already properly the files as multi-dimensional array with properly annotated axes. What was the reasoning to handle the ome-tiff case separately?

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@SeanLeRoy SeanLeRoy left a comment

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LGTM!

@SeanLeRoy SeanLeRoy merged commit ca9c114 into bioio-devs:main Nov 13, 2024
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lsm
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