Initial release with the following commands
Command | Description |
---|---|
ls | List all RADx studies that are contained in the RADx study tracker |
join | Joins study data into another CSV file based on a column identifier |
dir | Lists the subdirectories in a given directory and prints study information for directories that match the pattern phs\d+. For example phs002560 |
find | Finds a study by searching on the specified fields |
Requirements
This software requires Java 19, or higher, installed on the machine where you will install this software.
To install
- Download and place the executable jar file in a directory of your choice, for example,
/usr/local/bin
. - Create a script (to execute the .jar file) and save it in your executable path (Bash path). For example, create a bash script named
st
in/usr/local/bin
. - Edit the script to make it execute the .jar file. Add
java -jar /usr/local/bin/radx-study-tracker-0.9.0.jar "$@"
as a line in the script. - To execute, type
st --help
in a terminal.