Changes by run-edgetest action

.pre-commit-config.yaml

@@ -1,16 +1,16 @@
 repos:
-    -   repo: https://github.com/psf/black
-        rev: 22.10.0
-        hooks:
-        - id: black
-          exclude: (versioneer.py|_version.py)
+- repo: https://github.com/psf/black
+  rev: 23.7.0
+  hooks:
+  - id: black
+    exclude: (versioneer.py|_version.py)
 
-    -   repo: https://github.com/timothycrosley/isort
-        rev: 5.12.0
-        hooks:
-        - id: isort
+- repo: https://github.com/timothycrosley/isort
+  rev: 5.12.0
+  hooks:
+  - id: isort
 
-    - repo: https://gitlab.com/pycqa/flake8
-      rev: 3.9.2
-      hooks:
-          - id: flake8
+- repo: https://github.com/pycqa/flake8
+  rev: 6.1.0
+  hooks:
+  - id: flake8

docs/docs-environment.yml

@@ -17,13 +17,13 @@ dependencies:
 
   # install rubicon-ml dependencies
   # so local pip install doesn't
-  - dash<=2.11.1,>=2.0.0
-  - dash-bootstrap-components<=1.4.1,>=1.0.0
+  - dash<=2.13.0,>=2.0.0
+  - dash-bootstrap-components<=1.4.2,>=1.0.0
   - fsspec<=2023.6.0,>=2021.4.0
   - intake[dataframe]<=0.7.0,>=0.5.2
-  - numpy<=1.25.1,>=1.22.0
+  - numpy<=1.25.2,>=1.22.0
   - pandas<=2.0.3,>=1.0.0
   - prefect<=1.2.4,>=0.12.0
-  - pyarrow<=12.0.1,>=0.18.0
-  - PyYAML<=6.0,>=5.4.0
+  - pyarrow<=13.0.0,>=0.18.0
+  - PyYAML<=6.0.1,>=5.4.0
   - scikit-learn<=1.3.0,>=0.22.0

environment.yml

@@ -5,13 +5,13 @@ dependencies:
   - python>=3.8
   - pip
 
-  - click<=8.1.4,>=7.1
+  - click<=8.1.7,>=7.1
   - fsspec<=2023.6.0,>=2021.4.0
   - intake[dataframe]<=0.7.0,>=0.5.2
-  - numpy<=1.25.1,>=1.22.0
+  - numpy<=1.25.2,>=1.22.0
   - pandas<=2.0.3,>=1.0.0
-  - pyarrow<=12.0.1,>=0.18.0
-  - PyYAML<=6.0,>=5.4.0
+  - pyarrow<=13.0.0,>=0.18.0
+  - PyYAML<=6.0.1,>=5.4.0
   - scikit-learn<=1.3.0,>=0.22.0
 
   # for prefect extras
@@ -21,8 +21,8 @@ dependencies:
   - s3fs<=2023.6.0,>=0.4
 
   # for viz extras
-  - dash<=2.11.1,>=2.0.0
-  - dash-bootstrap-components<=1.4.1,>=1.0.0
+  - dash<=2.13.0,>=2.0.0
+  - dash-bootstrap-components<=1.4.2,>=1.0.0
 
   # for testing
   - black

rubicon_ml/sklearn/pipeline.py

@@ -318,7 +318,7 @@ def make_pipeline(
     steps = _name_estimators(steps)
     user_defined_loggers = _name_loggers(steps, loggers)
 
-    if type(project) != Project:
+    if not isinstance(project, Project):
         raise ValueError(
             "project" + str(project) + " must be of type rubicon_ml.client.project.Project"
         )

setup.cfg

@@ -28,13 +28,13 @@ zip_safe = False
 include_package_data = True
 packages = find:
 install_requires = 
-	click<=8.1.4,>=7.1
+	click<=8.1.7,>=7.1
 	fsspec<=2023.6.0,>=2021.4.0
 	intake[dataframe]<=0.7.0,>=0.5.2
-	numpy<=1.25.1,>=1.22.0
+	numpy<=1.25.2,>=1.22.0
 	pandas<=2.0.3,>=1.0.0
-	pyarrow<=12.0.1,>=0.18.0
-	PyYAML<=6.0,>=5.4.0
+	pyarrow<=13.0.0,>=0.18.0
+	PyYAML<=6.0.1,>=5.4.0
 	scikit-learn<=1.3.0,>=0.22.0
 
 [options.extras_require]
@@ -43,14 +43,14 @@ prefect =
 s3 = 
 	s3fs<=2023.6.0,>=0.4
 ui = 
-	dash<=2.11.1,>=2.0.0
-	dash-bootstrap-components<=1.4.1,>=1.0.0
+	dash<=2.13.0,>=2.0.0
+	dash-bootstrap-components<=1.4.2,>=1.0.0
 viz = 
-	dash<=2.11.1,>=2.0.0
-	dash-bootstrap-components<=1.4.1,>=1.0.0
+	dash<=2.13.0,>=2.0.0
+	dash-bootstrap-components<=1.4.2,>=1.0.0
 all = 
-	dash<=2.11.1,>=2.0.0
-	dash-bootstrap-components<=1.4.1,>=1.0.0
+	dash<=2.13.0,>=2.0.0
+	dash-bootstrap-components<=1.4.2,>=1.0.0
 	prefect<=1.2.4,>=0.12.0
 	s3fs<=2023.6.0,>=0.4
 

tests/unit/repository/test_local_repo.py

@@ -14,7 +14,7 @@ def test_initialization():
     local_repo = LocalRepository(root_dir="/local/root")
 
     assert local_repo.PROTOCOL == "file"
-    assert type(local_repo.filesystem) == fsspec.implementations.local.LocalFileSystem
+    assert isinstance(local_repo.filesystem, fsspec.implementations.local.LocalFileSystem)
 
 
 @patch("fsspec.implementations.local.LocalFileSystem.open")

tests/unit/repository/test_memory_repo.py

@@ -11,7 +11,7 @@ def test_initialization():
 
     assert memory_repo.PROTOCOL == "memory"
     assert memory_repo.root_dir == "/root"
-    assert type(memory_repo.filesystem) == fsspec.implementations.memory.MemoryFileSystem
+    assert isinstance(memory_repo.filesystem, fsspec.implementations.memory.MemoryFileSystem)
 
 
 def test_persist_dataframe():

tests/unit/repository/test_s3_repo.py

@@ -12,8 +12,7 @@
 def test_initialization():
     s3_repo = S3Repository(root_dir="s3://bucket/root")
 
-    assert s3_repo.PROTOCOL == "s3"
-    assert type(s3_repo.filesystem) == s3fs.core.S3FileSystem
+    assert isinstance(s3_repo.filesystem, s3fs.core.S3FileSystem)
 
 
 @patch("s3fs.core.S3FileSystem.open")

tests/unit/sklearn/test_pipeline.py

@@ -17,7 +17,7 @@ def test_get_default_estimator_logger(project_client, fake_estimator_cls):
 
     logger = pipeline.get_estimator_logger()
 
-    assert type(logger) == EstimatorLogger
+    assert isinstance(logger, EstimatorLogger)
 
 
 def test_get_user_defined_estimator_logger(project_client, fake_estimator_cls):
@@ -29,7 +29,7 @@ def test_get_user_defined_estimator_logger(project_client, fake_estimator_cls):
 
     logger = pipeline.get_estimator_logger("est")
 
-    assert type(logger) == FilterEstimatorLogger
+    assert isinstance(logger, FilterEstimatorLogger)
 
 
 def test_fit_logs_parameters(project_client, fake_estimator_cls):