Updated install to pyproject.toml

.github/workflows/main.yaml

@@ -1,30 +1,56 @@
-name: CI
 
+
+name: CI
 on:
   push:
-    branches:
-      - main
+    branches: [ "main" ]
   pull_request:
+    branches: [ "main" ]
+  workflow_dispatch:
+  schedule:
+    - cron: '0 0 * * 0' # Weekly “At 00:00”
+
+# concurrency:
+#   group: ${{ github.workflow }}-${{ github.ref }}
+#   cancel-in-progress: true
 
-concurrency:
-  group: ${{ github.workflow }}-${{ github.ref }}
-  cancel-in-progress: true
+# Note: This CI used to run off of the image:
+# carbonplan/cmip6-downscaling-single-user:2022.06.19
 
 jobs:
   test:
-    name: build-and-test
+    if: github.repository == 'carbonplan/cmip6_downscaling'
+    name: ${{ matrix.python-version }}-build
     runs-on: ubuntu-latest
+    strategy:
+      fail-fast: false
+      matrix:
+        python-version: ['3.9', '3.10'] #TODO: add 3.11 once sparse/numba support it
     timeout-minutes: 20
-    container:
-      image: carbonplan/cmip6-downscaling-single-user:2022.06.19
-      options: --user root
+    defaults:
+      run:
+        shell: bash -l {0}
     steps:
-      - uses: actions/checkout@v3
-      - name: Install
+      - name: Checkout
+        uses: actions/checkout@v4
+
+      - name: Install Conda environment from environment.yml
+        uses: mamba-org/setup-micromamba@v1
+        with:
+          # environment-file is not assumed anymore
+          environment-file: ci/environment.yml
+          create-args: >-
+            python=${{ matrix.python-version }}
+          # now called cache-environment
+          cache-environment: true
+
+      - name: Install package
+        run: |
+          python -m pip install -e . --no-deps
+      - name: Conda list information
         run: |
-          git config --global --add safe.directory /__w/cmip6-downscaling/cmip6-downscaling
-          python -m pip install -e .
-          python -m pip list
-      - name: Running Tests
+          conda env list
+          conda list
+      - name: Run tests
         run: |
-          python -m pytest --verbose
+          python -m pytest

cmip6_downscaling/_version.py

@@ -1,7 +1 @@
-from importlib.metadata import PackageNotFoundError, version
-
-try:
-    __version__ = version("cmip6-downscaling")
-except PackageNotFoundError:
-    # package is not installed
-    __version__ = 'unknown'
+__version__ = "1.0.post19+g9693dd4.d20240131"

pyproject.toml

@@ -1,14 +1,125 @@
+[build-system]
+requires = ["setuptools>=64", "setuptools-scm[toml]>=6.2", "wheel"]
+build-backend = "setuptools.build_meta"
+
 [project]
-name = 'cmip6-downscaling'
+name = "cmip6-downscaling"
 version = '0.1.11'
-description = 'README.md'
+description = "Climate downscaling using cmip6 data"
+readme = "README.md"
+license = { text = "MIT" }
+authors = [{ name = "CarbonPlan", email = "[email protected]" }]
+requires-python = ">=3.9"
+classifiers = [
+    "Development Status :: 4 - Beta",
+    "License :: OSI Approved :: MIT License",
+    "Operating System :: OS Independent",
+    "Intended Audience :: Science/Research",
+    "Programming Language :: Python",
+    "Programming Language :: Python :: 3",
+    "Programming Language :: Python :: 3.9",
+    "Programming Language :: Python :: 3.10",
+    "Topic :: Scientific/Engineering",
+]
+# dynamic = ["version"]
+
+dependencies = [
+"adlfs >= 2022.2.0",
+"carbonplan_data",
+"carbonplan[styles]",
+"cf-xarray>=0.7.3",
+"cmip6_preprocessing",
+"dask[complete]",
+"dask-kubernetes",
+"donfig >= 0.7.0",
+"fsspec",
+"intake",
+"intake-esm >= 2022.9.18",
+"intake-xarray",
+"ndpyramid == 0.0.6",
+"pandas",
+"prefect == 0.15.13",
+"rechunker",
+"regionmask",
+"scikit-downscale >= 0.1.2",
+"scikit-learn",
+"scipy",
+"universal-pathlib >= 0.0.12",
+"xarray >= 2022.3.0",
+"xarray-datatree == 0.0.6",
+"xarray_schema >= 0.0.3",
+"xclim",
+"zarr >= 2.11.3"
+]
+
+[project.optional-dependencies]
+dev = ["pytest","pytest-sugar","pytest-cov"]
+deepsd = ["tensorflow", "tensorflow-io"]
+analysis = ["cartopy", "seaborn", "carbonplan[styles]"]
+
+
+[project.urls]
+repository = "https://github.com/carbonplan/cmip6-downscaling"
 
+[tool.setuptools.packages.find]
+include = ["cmip6_downscaling*"]
 
 [tool.black]
 line-length = 100
-target-version = ['py38']
+target-version = ['py39']
 skip-string-normalization = true
 
+[tool.ruff]
+line-length = 100
+target-version = "py39"
+builtins = ["ellipsis"]
 
-[build-system]
-requires = ["setuptools>=30.3.0", "wheel", "setuptools_scm"]
+# Exclude a variety of commonly ignored directories.
+exclude = [
+    ".bzr",
+    ".direnv",
+    ".eggs",
+    ".git",
+    ".hg",
+    ".mypy_cache",
+    ".nox",
+    ".pants.d",
+    ".ruff_cache",
+    ".svn",
+    ".tox",
+    ".venv",
+    "__pypackages__",
+    "_build",
+    "buck-out",
+    "build",
+    "dist",
+    "node_modules",
+    "venv",
+]
+per-file-ignores = {}
+# E402: module level import not at top of file
+# E501: line too long - let black worry about that
+# E731: do not assign a lambda expression, use a def
+ignore = ["E402", "E501", "E731"]
+select = [
+    # Pyflakes
+    "F",
+    # Pycodestyle
+    "E",
+    "W",
+    # isort
+    "I",
+    # Pyupgrade
+    "UP",
+]
+
+
+[tool.ruff.mccabe]
+max-complexity = 18
+
+[tool.ruff.isort]
+known-first-party = ["cmip6_downscaling"]
+
+[tool.pytest.ini_options]
+console_output_style = "count"
+addopts = "--cov=./ --cov-report=xml --verbose"