import settings before logging

cellarium-ai · Sep 12, 2024 · 19ef38a · 19ef38a
1 parent f757777
commit 19ef38a
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diff --git a/cellarium/cas/postprocessing/cell_ontology/cell_ontology_cache.py b/cellarium/cas/postprocessing/cell_ontology/cell_ontology_cache.py
@@ -1,12 +1,12 @@
 import logging
 import typing as t
 from functools import lru_cache
-from logging import log
 
 import networkx as nx
 import owlready2
 from scipy import sparse as sp
 
+from cellarium.cas import settings
 from cellarium.cas._io import suppress_stderr
 
 # Used in CZ CELLxGENE schema v5:

diff --git a/cellarium/cas/visualization/circular_tree_plot_umap_dash_app/app.py b/cellarium/cas/visualization/circular_tree_plot_umap_dash_app/app.py
@@ -14,6 +14,7 @@
 from dash.development.base_component import Component
 from plotly.express.colors import sample_colorscale
 
+from cellarium.cas import settings
 from cellarium.cas.postprocessing import (
     CAS_CL_SCORES_ANNDATA_OBSM_KEY,
     CAS_METADATA_ANNDATA_UNS_KEY,