removed typo

cellgeni · Aug 2, 2023 · 4fdb014 · 4fdb014
1 parent 4126b1b
commit 4fdb014
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/main.nf b/main.nf
@@ -137,7 +137,7 @@ process step2 {
 
     if [ "${FILETYPE}" == "BAM" ]; then
       mv done_wget/*.bam* "done_wget/${SAMPLE}.bam"
-    elif [ "${FILETYPE}" == "GZ1" ] || [ [ "${FILETYPE}" == "GZ2" ]; then
+    elif [ "${FILETYPE}" == "GZ1" ] || [ "${FILETYPE}" == "GZ2" ]; then
       echo "need to do move fastqs to correct extension too but need to see how fastqs are passed to metadata"
       echo "that could change how this process works for fastqs"
     fi