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usethis::use_github_action()
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courtiol committed Nov 4, 2023
1 parent 405875b commit 71a4d26
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1 change: 1 addition & 0 deletions .Rbuildignore
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^scripts$
^README\.Rmd$
^biblio$
^\.github$
1 change: 1 addition & 0 deletions .github/.gitignore
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*.html
49 changes: 49 additions & 0 deletions .github/workflows/R-CMD-check.yaml
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# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
push:
branches: [main, master]
pull_request:
branches: [main, master]

name: R-CMD-check

jobs:
R-CMD-check:
runs-on: ${{ matrix.config.os }}

name: ${{ matrix.config.os }} (${{ matrix.config.r }})

strategy:
fail-fast: false
matrix:
config:
- {os: macos-latest, r: 'release'}
- {os: windows-latest, r: 'release'}
- {os: ubuntu-latest, r: 'devel', http-user-agent: 'release'}
- {os: ubuntu-latest, r: 'release'}
- {os: ubuntu-latest, r: 'oldrel-1'}

env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
R_KEEP_PKG_SOURCE: yes

steps:
- uses: actions/checkout@v3

- uses: r-lib/actions/setup-pandoc@v2

- uses: r-lib/actions/setup-r@v2
with:
r-version: ${{ matrix.config.r }}
http-user-agent: ${{ matrix.config.http-user-agent }}
use-public-rspm: true

- uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: any::rcmdcheck
needs: check

- uses: r-lib/actions/check-r-package@v2
with:
upload-snapshots: true
50 changes: 50 additions & 0 deletions .github/workflows/test-coverage.yaml
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# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
push:
branches: [main, master]
pull_request:
branches: [main, master]

name: test-coverage

jobs:
test-coverage:
runs-on: ubuntu-latest
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}

steps:
- uses: actions/checkout@v3

- uses: r-lib/actions/setup-r@v2
with:
use-public-rspm: true

- uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: any::covr
needs: coverage

- name: Test coverage
run: |
covr::codecov(
quiet = FALSE,
clean = FALSE,
install_path = file.path(normalizePath(Sys.getenv("RUNNER_TEMP"), winslash = "/"), "package")
)
shell: Rscript {0}

- name: Show testthat output
if: always()
run: |
## --------------------------------------------------------------------
find ${{ runner.temp }}/package -name 'testthat.Rout*' -exec cat '{}' \; || true
shell: bash

- name: Upload test results
if: failure()
uses: actions/upload-artifact@v3
with:
name: coverage-test-failures
path: ${{ runner.temp }}/package
1 change: 1 addition & 0 deletions README.Rmd
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Expand Up @@ -24,6 +24,7 @@ knitr::opts_chunk$set(
status](https://www.r-pkg.org/badges/version/fw)](https://CRAN.R-project.org/package=timevarcorr)
[![Lifecycle:
experimental](https://img.shields.io/badge/lifecycle-experimental-orange.svg)](https://lifecycle.r-lib.org/articles/stages.html#experimental)
[![R-CMD-check](https://github.com/courtiol/timevarcorr/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/courtiol/timevarcorr/actions/workflows/R-CMD-check.yaml)
<!-- badges: end -->

This R package aims at computing the correlation between 2 time-series following the method described in the following paper:
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3 changes: 2 additions & 1 deletion README.md
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Expand Up @@ -9,6 +9,7 @@
status](https://www.r-pkg.org/badges/version/fw)](https://CRAN.R-project.org/package=timevarcorr)
[![Lifecycle:
experimental](https://img.shields.io/badge/lifecycle-experimental-orange.svg)](https://lifecycle.r-lib.org/articles/stages.html#experimental)
[![R-CMD-check](https://github.com/courtiol/timevarcorr/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/courtiol/timevarcorr/actions/workflows/R-CMD-check.yaml)
<!-- badges: end -->

This R package aims at computing the correlation between 2 time-series
Expand Down Expand Up @@ -254,7 +255,7 @@ devtools::session_info()
#> xtable 1.8-4 2019-04-21 [4] RSPM (R 4.2.0)
#> yaml 2.3.7 2023-01-23 [4] RSPM (R 4.2.0)
#>
#> [1] /tmp/RtmpkQQ6YK/temp_libpathd403f126c8f14
#> [1] /tmp/RtmpkQQ6YK/temp_libpathd403f4af7a494
#> [2] /home/courtiol/R/x86_64-pc-linux-gnu-library/4.3
#> [3] /usr/local/lib/R/site-library
#> [4] /usr/lib/R/site-library
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