test: added manual city test #75

	name: Build hydrodiy

	on: [push]

	jobs:
	build-linux:
	runs-on: ubuntu-latest

	strategy:
	max-parallel: 5

	defaults:
	run:
	shell: bash -l {0}
	steps:
	- uses: actions/checkout@v2

	- name: Set up Python 3.10
	uses: actions/setup-python@v3
	with:
	python-version: '3.10'

	- name: Add conda to system path
	run: \|
	# $CONDA is an environment variable pointing to the root of the miniconda directory
	echo $CONDA/bin >> $GITHUB_PATH

	- name: Create conda environment if needed
	run: \|
	source $CONDA/etc/profile.d/conda.sh
	conda env create -f env_mini.yml

	- name : Install hydrodiy package in conda env
	run: \|
	source $CONDA/etc/profile.d/conda.sh
	conda activate env_mini
	pip install -e .

	- name: Run tests
	run: \|
	source $CONDA/etc/profile.d/conda.sh
	conda activate env_mini
	pytest --cov=hydrodiy --cov-config=.coveragerc --junitxml=junit/test-results.xml --cov-report=xml --cov-report=html hydrodiy

	- name: Upload pytest test results
	uses: actions/upload-artifact@v3
	with:
	name: pytest-results
	path: junit/test-results.xml

	# Use always() to always run this step to publish test results when there are test failures
	if: ${{ always() }}

	- name: Upload to codecov
	uses: codecov/codecov-action@v3

	- name: Run examples
	run: \|
	source $CONDA/etc/profile.d/conda.sh
	conda activate env_mini
	python examples/run_all_examples.py

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