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linting for alias script
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jsheunis committed Apr 10, 2024
1 parent ab2fbea commit b7af8b4
Showing 1 changed file with 6 additions and 7 deletions.
13 changes: 6 additions & 7 deletions tools/create_alias_concept_metadata.py
Original file line number Diff line number Diff line change
Expand Up @@ -7,7 +7,7 @@
import csv
import json
from pathlib import Path
from datalad.api import (
from datalad.api import (
catalog_add,
)
from datalad_catalog.constraints import EnsureWebCatalog
Expand All @@ -16,10 +16,9 @@


def add_aliases(alias_path, catalog):

alias_path = Path(alias_path)
with alias_path.open(newline='') as tsvfile:
reader = csv.DictReader(tsvfile, delimiter='\t')
with alias_path.open(newline="") as tsvfile:
reader = csv.DictReader(tsvfile, delimiter="\t")
for i, row in enumerate(reader):
meta_item = get_metadata_item(
item_type="dataset",
Expand All @@ -36,6 +35,7 @@ def add_aliases(alias_path, catalog):
metadata=json.dumps(meta_item),
)


def create_metadata_files(catalog):
# Get report
report = catalog.get_catalog_report()
Expand Down Expand Up @@ -76,7 +76,6 @@ def create_metadata_files(catalog):
json.dump(redirect_dict, f)



if __name__ == "__main__":
parser = ArgumentParser()
parser.add_argument(
Expand All @@ -94,7 +93,7 @@ def create_metadata_files(catalog):
catalog = EnsureWebCatalog()(args.catalog)

# If aliases are provided, first set them in metadata
if (args.aliases):
if args.aliases:
add_aliases(args.aliases, catalog)

create_metadata_files(catalog)
create_metadata_files(catalog)

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