GitHub - donutbrew/BIO_scripts: Various scripts

Name		Name	Last commit message	Last commit date
Latest commit History 1 Commit
batch_renamer.sh		batch_renamer.sh
fasta_avglen.sh		fasta_avglen.sh
fasta_validate.pl		fasta_validate.pl
fastascrub.sh		fastascrub.sh
fastq_a.pl		fastq_a.pl
kraken_extract_lineage.pl		kraken_extract_lineage.pl
kraken_top10.pl		kraken_top10.pl
krakpipe2.sh		krakpipe2.sh
krakpipe_classify.sh		krakpipe_classify.sh
parse_m8.pl		parse_m8.pl
pdd_trim.sh		pdd_trim.sh
pdd_trim2.sh		pdd_trim2.sh
peak_map2.sh		peak_map2.sh
peak_map_batchbygenus.sh		peak_map_batchbygenus.sh
quickmap.sh		quickmap.sh
readmap_diversity.sh		readmap_diversity.sh
sam2bami.sh		sam2bami.sh
surpi-summary2.sh		surpi-summary2.sh
surpi_blast_fastas.sh		surpi_blast_fastas.sh
surpi_blast_fastas_parse.pl		surpi_blast_fastas_parse.pl
surpi_blast_fastas_parse.pl~		surpi_blast_fastas_parse.pl~
surpi_blast_summary.sh		surpi_blast_summary.sh
surpi_blast_summary.sh~		surpi_blast_summary.sh~
surpi_consolidate_maps.sh		surpi_consolidate_maps.sh
surpi_coverage_consolidate.sh		surpi_coverage_consolidate.sh
surpi_extract_by_id.sh		surpi_extract_by_id.sh
surpi_extract_by_id2.sh		surpi_extract_by_id2.sh
surpi_generate_consfrag.sh		surpi_generate_consfrag.sh
surpi_scrapegenus.pl		surpi_scrapegenus.pl
surpi_scrapegenus_fromsummary.pl		surpi_scrapegenus_fromsummary.pl
tarcopy.sh		tarcopy.sh
valley_map.sh		valley_map.sh
valley_map_summary.sh		valley_map_summary.sh