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V1.4.4 #354

Merged
merged 6 commits into from
Sep 27, 2024
Merged

V1.4.4 #354

merged 6 commits into from
Sep 27, 2024

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t-young31
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@shoubhikraj did you want to add anything else into this release?

t-young31 and others added 6 commits June 21, 2024 11:03
* initial commit

* update constraint code

* unfinished update

* minor changes

* unfinished update

* refactor dic constraints

* uninished updates

* uninished updates

* bugixes

* small changes

* prfo update

* rename improper dihedral

* PRFO update

* test fix

* test fixes

* update

* small update

* cartesian update

* minor update

* unifinished update

* unifinished update

* partial fix

* bugfix

* remove cartesian constraints

* testfix

* testfix 2

* add tests

* revert parts of prfo update

* remove unnecessary line

* comment

* add test for PRFO

* pr suggestions

* pr suggestions 2

* revert to original CRFO code

* force hessian to be positive definite

* prfo fixes

* updates

* update

* add test

* update changelog and remove unused code
* fix compat with numpy v2.0

* allclose small a/rtol
* initial commit

* initial commit

* constrained bond

* allow extra primitives in optimiser

* active subspace

* fix bug

* trm

* trm update

* trm update

* trm update

* trust radius update

* trust radius update

* small update

* rfo update

* refactor to maxmove

* refactor qa

* small update

* remove redundant imports

* add test for QA, DIC bugfix

* add test for trust radius update

* test bugfix

* more bugfixes

* minor bugfix

* bug fix

* add extra test

* fix test bug

* add tests

* bug fixes

* test fix and add test

* remove extra code

* pr suggestion 1

* pr suggestion 2

* pr suggestion 2

* pr suggestion 3

* bug fix

* save one DIC backtransform

* unfinished update

* unfinished update 2

* refactor code

* update changelog
* use close_to for IBT

* hybrid SIBT IBT algorithm

* remove unnecessary B matrix calculation

* refactor G matrix

* update tests

* revert AnyPIC extend override and test fix

* pr suggestions
* optimiser criteria

* minor edits

* simplify convergence criteria

* unfinished update

* convergence criteria set

* minor update

* unfinished update

* new update

* unfinished updates

* replace tol in DHS

* improve sign usage

* unfinished bugfix

* refactor class

* update dhs class

* minor update

* fix some tests

* minor update

* minor update

* allow None values in convergence criteria

* refactor convergence params

* fix some tests

* update some tests

* fixed crfo tests

* fixed prfo tests

* more test fixes

* black fix

* fix nwchem issues

* fix xtb issues

* updated parameters

* add tests, remove redundant code

* fix bug

* bug fix 2

* pr suggestion 1

* pr suggestion 2

* pr suggestion 3

* pr suggestion 3

* pr suggestion 4

* update changelog
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codecov bot commented Sep 26, 2024

Codecov Report

Attention: Patch coverage is 99.04421% with 8 lines in your changes missing coverage. Please review.

Project coverage is 97.47%. Comparing base (2f3af32) to head (d4ba0a4).

Files with missing lines Patch % Lines
autode/opt/optimisers/qa.py 92.53% 5 Missing ⚠️
autode/opt/coordinates/dic.py 98.86% 1 Missing ⚠️
autode/opt/optimisers/base.py 99.17% 1 Missing ⚠️
autode/opt/optimisers/crfo.py 98.92% 1 Missing ⚠️
Additional details and impacted files
@@            Coverage Diff             @@
##           master     #354      +/-   ##
==========================================
+ Coverage   97.38%   97.47%   +0.08%     
==========================================
  Files         202      204       +2     
  Lines       23210    23758     +548     
==========================================
+ Hits        22604    23158     +554     
+ Misses        606      600       -6     
Flag Coverage Δ
unittests 97.47% <99.04%> (+0.08%) ⬆️

Flags with carried forward coverage won't be shown. Click here to find out more.

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@shoubhikraj
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@t-young31 Nothing to add soon, so feel free to release this 😄

@t-young31 t-young31 merged commit 6a6eebe into master Sep 27, 2024
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2 participants