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include v2.8.1 and v2.8.2
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Aisha-D committed May 1, 2024
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2 changes: 1 addition & 1 deletion dxapp.json
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"summary": "Create Excel workbook from VEP annotated vcf",
"dxapi": "1.0.0",
"version": "2.9.0",
"whatsNew": "* v2.0.0 Rewrite of previous app to generate xlsx file from a VEP annotated VCF(s); * v2.0.1 Bug fix to correctly treat CHROM as string values; * v2.0.2 Bug fix for ACMG report template structure; * v2.0.3 Bug fixes for issues with hyperlinks, changed app name to eggd_generate_variant_workbook; * v2.1.0 Handle VCFs from GATK gCNV and Illumina TSO500, readability tweaks to variant sheets; * v2.1.1 Bug fix for typing of numeric values in hyperlinks; * v2.2.0 Added ability to pass in non VCF files (tsvs/csvs and images) to additional sheets, optional adding of links to DECIPHER with --decipher; * v2.3.0 Added conditional colouring of cells in variant sheets, new 'basic' summary sheet; * v2.4.0 Added handling for duplicate annotation in VEP fields (i.e. cosmic, CGC, etc..); * v2.5.0 Better parsing of CombinedVariantOutput files as additional files; * v2.6.0 Add variant counts as DNAnexus file details to the .xlsx workbook; *v2.7.0 Handle pre-split and non VEP annotated VCFs, improvements to Dias reporting templates and Excel data validation; * v2.7.1 v.2.7.0 app was accidentally published on DNAnexus before testing; so a new version is created. Everything except version number is the same as v2.7.0; * v2.8.0 Add PID box in summary, swap BS1 and BA1 in interpret table, increase the number of unlocked rows to 500; * v2.9.0 Presents Uranus VCFs",
"whatsNew": "* v2.0.0 Rewrite of previous app to generate xlsx file from a VEP annotated VCF(s); * v2.0.1 Bug fix to correctly treat CHROM as string values; * v2.0.2 Bug fix for ACMG report template structure; * v2.0.3 Bug fixes for issues with hyperlinks, changed app name to eggd_generate_variant_workbook; * v2.1.0 Handle VCFs from GATK gCNV and Illumina TSO500, readability tweaks to variant sheets; * v2.1.1 Bug fix for typing of numeric values in hyperlinks; * v2.2.0 Added ability to pass in non VCF files (tsvs/csvs and images) to additional sheets, optional adding of links to DECIPHER with --decipher; * v2.3.0 Added conditional colouring of cells in variant sheets, new 'basic' summary sheet; * v2.4.0 Added handling for duplicate annotation in VEP fields (i.e. cosmic, CGC, etc..); * v2.5.0 Better parsing of CombinedVariantOutput files as additional files; * v2.6.0 Add variant counts as DNAnexus file details to the .xlsx workbook; *v2.7.0 Handle pre-split and non VEP annotated VCFs, improvements to Dias reporting templates and Excel data validation; * v2.7.1 v.2.7.0 app was accidentally published on DNAnexus before testing; so a new version is created. Everything except version number is the same as v2.7.0; * v2.8.0 Add PID box in summary, swap BS1 and BA1 in interpret table, increase the number of unlocked rows to 500; ; * v2.8.1 Update lock_sheet function to allow formatting cols/rows; * v2.8.2 Update summary sheet titles and tables * v2.9.0 Presents Uranus VCFs",
"authorizedUsers": [
"org-emee_1"
],
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