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IDMP Ontology Release 1.1.0

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@mereolog mereolog released this 10 Apr 15:10
· 195 commits to master since this release
1e2779c

IDMP Ontology Release 1.1.0

Ontology Development in Details

In Q1 2024 there were two primary areas of work, including:

  1. significant additions to cover details needed for representation of biologics – organisms, parts of organisms, the subset of the Linnean taxonomy needed for herbal substances, inheritance relationships between organisms, completion of the model with respect to target and target interaction, and related areas in the ISO 11238 Substance ontology, and
  2. significant additions to cover gaps in the ISO 11615 model related to medicinal products, package items and other concepts required for the jurisdiction-agnostic UC4 – adding concepts representing attributes and relations that were not completely modeled for therapeutic indications, contraindications, and population characteristics; completing the definition of pharmaceutical product characteristic, completing details for manufactured item and package item, completing details related to pharmaceutical dose form and its subclasses (administrable, combined), and related restrictions on medicinal product, and adding missing attributes and relations such as ‘special measures’, pediatric use indicator, and monitoring indicator, as well as addressing other miscellaneous gaps and issues in restrictions in that part of the ontology for ISO 11615.

Qualitative Comparison To Previous Release

Overview

Three of the SPAR ontologies (related to library science, which we were not using) were deleted:

  • frbr
  • c4o
  • datacite

The following ontologies were changed:

Ontologies Deleted Resources New Resources Modified Resources
AmlodipineExample 0 0 2
deo 16 0 0
doco 16 13 37
DocumentComponents 0 0 8
ISO1087-TerminologyScience 0 0 1
ISO1087-VocabularyForTermsAndDefinitions 0 0 2
ISO11238-Substances 2 53 44
ISO11615-MedicinalProducts 1 17 50
ISO21090-HarmonizedDatatypes 2 0 3
MedicalDictionaryForRegulatoryActivities 0 0 1
Organizations 0 0 8
po 31 30 0
ProductsAndServices 0 0 4
QlairaExample 6 8 4
QuantitiesAndUnits 0 2 18
RegistrationAuthorities 0 0 3
RegulatoryAgencies 0 0 2
StatisticalMeasures 0 0 3
SubstancesProductsOrganisationsReferentials 0 0 1

Details

idmp_different_ontologies_in_repository_versions.xlsx

idmp_different_resources_in_ontology_revisions.xlsx

idmp_different_axioms_for_same_subjects.txt

What's Changed

  • IDMP-657 - add missing package item properties by @tw-osthus in #555
  • IDMP-713 - Augment the ontology to incorporate additional information related to biologics by @ElisaKendall in #554
  • IDMP-713a - Augment the ontology to incorporate additional information related to biologics by @ElisaKendall in #557
  • IDMP-726 - Augment / revise the ontology to cover gaps w.r.t. ISO 11615 for UC4 by @ElisaKendall in #559

Full Changelog: master_v1.0.0...master_v1.1.0