ROBOT enanomapper-dev build test #163
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| name: ROBOT enanomapper-dev build test | |
| on: | |
| workflow_dispatch: | |
| workflow_run: | |
| workflows: ["Build slims"] | |
| types: | |
| - completed | |
| jobs: | |
| robot-workflows: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: checkout repo | |
| uses: actions/checkout@v4 | |
| - name: retrieve urls from config file | |
| run: | | |
| config_file="config.yaml" | |
| robot_jar="" | |
| robot="" | |
| slimmer="" | |
| while IFS=":" read -r key value; do | |
| key=$(echo "$key" | tr -d '[:space:]') | |
| case "$key" in | |
| robot-jar) | |
| robot_jar=$(echo "$value" | tr -d '[:space:]') | |
| ;; | |
| robot-wrapper) | |
| robot=$(echo "$value" | tr -d '[:space:]') | |
| ;; | |
| esac | |
| done < "$config_file" | |
| echo 'robot='${robot}'' >> $GITHUB_ENV | |
| echo 'robot_jar='${robot_jar}'' >> $GITHUB_ENV | |
| echo ROBOT JAR: $robot_jar | |
| echo ROBOT WRAPPER: $robot | |
| - name: get robot | |
| run: | | |
| ls | |
| wget ${{ env.robot }} | |
| wget ${{ env.robot_jar }} | |
| mkdir -p robot-report | |
| - name: merge | |
| run: | | |
| sh robot merge -i enanomapper-dev.owl -o enanomapper-dev-full.owl | |
| sh robot merge -i enanomapper.owl -o enanomapper-full.owl | |
| # Upload owl artifacts | |
| - name: 'Upload enanomapper* artifacts' | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: enanomapper-files | |
| path: enanomapper* | |
| - name: report | |
| run: sh robot report --fail-on none -i enanomapper-dev-full.owl -o robot-report/report.tsv | |
| - name: diff | |
| run: | | |
| sh robot diff --left enanomapper-full.owl --right enanomapper-dev-full.owl --output robot-report/diff.txt | |
| - name: reason | |
| run: | | |
| sh robot reason --reasoner ELK --input enanomapper-dev-full.owl -D debug-dev.owl | |
| sh robot reason --reasoner ELK --input enanomapper-full.owl -D debug.owl | |
| FILE=debug* | |
| if test -f "$FILE"; then | |
| echo $(DEBUG=True) >> $GITHUB_ENV | |
| fi | |
| - name: rm temp owl files | |
| run: | | |
| rm enanomapper-full.owl | |
| rm enanomapper-dev-full.owl | |
| # Upload debug artifacts | |
| - name: 'Upload enanomapper* artifacts' | |
| uses: actions/upload-artifact@v3 | |
| if: ${{ env.DEBUG }} | |
| with: | |
| name: debug-files | |
| path: debug* | |
| - name: 'Upload report' | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: report | |
| path: ./robot-report/* | |
| - name: Create issue about failure | |
| if: failure() | |
| uses: JasonEtco/[email protected] | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| with: | |
| filename: .github/action-issue-template.md | |
| update_existing: true | |