-
Notifications
You must be signed in to change notification settings - Fork 22
Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
- Loading branch information
Showing
9 changed files
with
291 additions
and
1 deletion.
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,23 @@ | ||
Ketcher 2.22.0 | ||
-------------- | ||
|
||
Ketcher distributions | ||
^^^^^^^^^^^^^^^^^^^^^ | ||
|
||
`Ketcher 2.22.0 standalone <https://lifescience.opensource.epam.com/downloads/ketcher/ketcher-v2.22.0/ketcher-standalone-2.22.0.zip>`__ | ||
|
||
`Ketcher 2.22.0 remote <https://lifescience.opensource.epam.com/downloads/ketcher/ketcher-v2.22.0/ketcher-remote-2.22.0.zip>`__ | ||
|
||
|
||
NPM packages | ||
^^^^^^^^^^^^ | ||
|
||
| `ketcher-core <https://www.npmjs.com/package/ketcher-core/v/2.22.0>`__ | ||
| `ketcher-react <https://www.npmjs.com/package/ketcher-react/v/2.22.0>`__ | ||
| `ketcher-standalone <https://www.npmjs.com/package/ketcher-standalone/v/2.22.0>`__ | ||
|
||
Source code | ||
^^^^^^^^^^^ | ||
|
||
`Source code on GitHub <https://github.com/epam/ketcher/releases/tag/v2.22.0>`__ |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,23 @@ | ||
Ketcher 2.23.0 | ||
-------------- | ||
|
||
Ketcher distributions | ||
^^^^^^^^^^^^^^^^^^^^^ | ||
|
||
`Ketcher 2.23.0 standalone <https://lifescience.opensource.epam.com/downloads/ketcher/ketcher-v2.23.0/ketcher-standalone-2.23.0.zip>`__ | ||
|
||
`Ketcher 2.23.0 remote <https://lifescience.opensource.epam.com/downloads/ketcher/ketcher-v2.23.0/ketcher-remote-2.23.0.zip>`__ | ||
|
||
|
||
NPM packages | ||
^^^^^^^^^^^^ | ||
|
||
| `ketcher-core <https://www.npmjs.com/package/ketcher-core/v/2.23.0>`__ | ||
| `ketcher-react <https://www.npmjs.com/package/ketcher-react/v/2.23.0>`__ | ||
| `ketcher-standalone <https://www.npmjs.com/package/ketcher-standalone/v/2.23.0>`__ | ||
|
||
Source code | ||
^^^^^^^^^^^ | ||
|
||
`Source code on GitHub <https://github.com/epam/ketcher/releases/tag/v2.23.0>`__ |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,23 @@ | ||
Ketcher 2.24.0 | ||
-------------- | ||
|
||
Ketcher distributions | ||
^^^^^^^^^^^^^^^^^^^^^ | ||
|
||
`Ketcher 2.24.0 standalone <https://lifescience.opensource.epam.com/downloads/ketcher/ketcher-v2.24.0/ketcher-standalone-2.24.0.zip>`__ | ||
|
||
`Ketcher 2.24.0 remote <https://lifescience.opensource.epam.com/downloads/ketcher/ketcher-v2.24.0/ketcher-remote-2.24.0.zip>`__ | ||
|
||
|
||
NPM packages | ||
^^^^^^^^^^^^ | ||
|
||
| `ketcher-core <https://www.npmjs.com/package/ketcher-core/v/2.24.0>`__ | ||
| `ketcher-react <https://www.npmjs.com/package/ketcher-react/v/2.24.0>`__ | ||
| `ketcher-standalone <https://www.npmjs.com/package/ketcher-standalone/v/2.24.0>`__ | ||
|
||
Source code | ||
^^^^^^^^^^^ | ||
|
||
`Source code on GitHub <https://github.com/epam/ketcher/releases/tag/v2.24.0>`__ |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
|
@@ -38,3 +38,6 @@ Contents: | |
ketcher-2.19.0 | ||
ketcher-2.20.0 | ||
ketcher-2.21.0 | ||
ketcher-2.22.0 | ||
ketcher-2.23.0 | ||
ketcher-2.24.0 |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,61 @@ | ||
|
||
# Ketcher 2.22.0 | ||
|
||
## What's Changed | ||
|
||
Here are the updated release notes with links to the corresponding issues: | ||
|
||
### New features | ||
* [#3934](https://github.com/epam/ketcher/issues/3934) – Support selection entity selection flag in KET format | ||
* [#4307](https://github.com/epam/ketcher/issues/4307) – Migrate Monomer library from MOL V2K to KET format | ||
* [#4388](https://github.com/epam/ketcher/issues/4388) – Allow Nucleoside of sequence edit in RNA builder | ||
* [#4427](https://github.com/epam/ketcher/issues/4427) – Store custom presets in browser local cache by | ||
* [#4495](https://github.com/epam/ketcher/issues/4495) – UI support for IDT import/export | ||
* [#4530](https://github.com/epam/ketcher/issues/4530) – Convert Rx connection points created in molecules mode into chem attachment points in macromolecules mode | ||
* [#4531](https://github.com/epam/ketcher/issues/4531) – Allow moving and connecting "small" structures in macro mode | ||
* [#4539](https://github.com/epam/ketcher/issues/4539) – Export macromolecules canvas as svg image | ||
* [#4692](https://github.com/epam/ketcher/issues/4692) – Cursors should be copied from small mode | ||
* [#4697](https://github.com/epam/ketcher/issues/4697) – Highlight connection point (change mouse cursor) on mouse hover | ||
* [#4311](https://github.com/epam/ketcher/issues/4311) – Send monomer library from Ketcher to Indigo upon monomers import/export | ||
* [#4530](https://github.com/epam/ketcher/issues/4530) – Add ability to define attachment points for molecules | ||
* [#4380](https://github.com/epam/ketcher/issues/4380) – Display IDT aliases in monomer library | ||
* [#4701](https://github.com/epam/ketcher/issues/4701) – Unify toolbars with small molecules mode | ||
* [#4530](https://github.com/epam/ketcher/issues/4530) – Add ability to define attachment points for molecules fixes | ||
* [#5391](https://github.com/epam/ketcher/issues/5391) – Migrate to Indigo 1.21.0 in-browser module | ||
|
||
### Bugfixes and improvements | ||
* [#3943](https://github.com/epam/ketcher/issues/3943) – System allow to create atoms with Charge value out or range | ||
* [#3501](https://github.com/epam/ketcher/issues/3501) – 3d mol files appear as 2D in Miew | ||
* [#4349](https://github.com/epam/ketcher/issues/4349) – Selection does not work in sequence editing with Shift+Up/Down arrow combination | ||
* [#4508](https://github.com/epam/ketcher/issues/4508) – In the Text-editing mode, when selecting nucleotides linked through phosphates R2-R2, an error appears in the Console | ||
* [#4340](https://github.com/epam/ketcher/issues/4340) – When adding new nucleotides to the beginning of a row, the order of the chains changes in the Sequence mode | ||
* [#4470](https://github.com/epam/ketcher/issues/4470) – Any click on toolbar buttons should cause cancel of "Modify in RNA builder" process | ||
* [#4479](https://github.com/epam/ketcher/issues/4479) – Quick double paste operation from clipboard leads to invalid entities on canvas | ||
* [#4488](https://github.com/epam/ketcher/issues/4488) – System doesn't allow duplicate same preset twice | ||
* [#4501](https://github.com/epam/ketcher/issues/4501) – The system allows you to paste on canvas while modifying nucleotides in the RNA builder | ||
* [#4640](https://github.com/epam/ketcher/issues/4640) – Presets saved to local storage appear on canvas after switching Macro/Micro modes | ||
* [#4615](https://github.com/epam/ketcher/issues/4615) – Implement sorting for RNA builder components | ||
* [#4543](https://github.com/epam/ketcher/issues/4543) – The cleared object is not returned by the Undo button in the Macromolecules mode. | ||
* [#4590](https://github.com/epam/ketcher/issues/4590) – RNA Structure is broken while we Copy from Macro and Paste to Micro canvas. | ||
* [#4509](https://github.com/epam/ketcher/issues/4509) – In the Text-editing mode, when inserting a fragment after pressing Ctrl+V twice, the cursor is moved to another row | ||
* [#3816](https://github.com/epam/ketcher/issues/3816) – Added validations and monomer Item disablement | ||
* [#4575](https://github.com/epam/ketcher/issues/4575) – New Sequences are created while we add cyclic to middle of sequence. | ||
* [#4693](https://github.com/epam/ketcher/issues/4693) – Incorrect bond alignment to tBu S-group | ||
* [#4730](https://github.com/epam/ketcher/issues/4730) – System doubles number of pasted monomers after switching from flex to sequence | ||
* [#4734](https://github.com/epam/ketcher/issues/4734) – Monomers from macro mode are not erased by Erase tool in micro mode | ||
* [#4690](https://github.com/epam/ketcher/issues/4690) – Undo problem while layout is changed on the Snack of Flex modes and switch through modes | ||
* [#4744](https://github.com/epam/ketcher/issues/4744) – When changing zoom level in macro mode, there is no percentage indication | ||
* [#4739](https://github.com/epam/ketcher/issues/4739) – Pasting IDT structures via clipboard does not work | ||
* [#4740](https://github.com/epam/ketcher/issues/4740) – Delete of cycled sequence from the canvas causes delete of another cycled sequence bond that makes it non-cycled | ||
* [#4764](https://github.com/epam/ketcher/issues/4764) – IDT label is not shown or shown but layout is broken after load sequence from ket | ||
* [#4726](https://github.com/epam/ketcher/issues/4726) – Delete of nucleoside symbol turns another nucleoside to nucleotide | ||
* [#4777](https://github.com/epam/ketcher/issues/4777) – Incorrect valence for carbon atom in ring with attachment point after saving and reopening file | ||
* [#4801](https://github.com/epam/ketcher/issues/4801) – Cut operation for attachment points makes canvas inaccessible/in-operational and delete entire molecule | ||
* [#4708](https://github.com/epam/ketcher/issues/4708) – Forbid merging cyclic sequences on delete in Sequence mode | ||
* [#4823](https://github.com/epam/ketcher/issues/4823) – In sequence mode, each press adds two characters and when deleted, also removes two | ||
* [#4824](https://github.com/epam/ketcher/issues/4824) – Cycled chain breaks sequence canvas and entire app | ||
* [#4839](https://github.com/epam/ketcher/issues/4839) – System loses connections to molecule R2 if there is no R1 attachment point | ||
* [#4836](https://github.com/epam/ketcher/issues/4836) – Molecule changes position after saving and opening from file | ||
* [#4840](https://github.com/epam/ketcher/issues/4840) – Paste from clipboard does not work for molecules in macro mode | ||
* [#4879](https://github.com/epam/ketcher/issues/4879) – Save to mol for micro and macro structures connected through attachment points works wrong | ||
* [#4973](https://github.com/epam/ketcher/issues/4973) – Connection between molecule and monomer lost after opening and saving to ket |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,48 @@ | ||
|
||
# Ketcher 2.23.0 | ||
|
||
## What's Changed | ||
|
||
Here are the updated release notes with links to the corresponding issues: | ||
|
||
### New features | ||
* [#4852](https://github.com/epam/ketcher/issues/4852) – UX support for HELM import/export | ||
* [#4846](https://github.com/epam/ketcher/issues/4846) – Make Sequence view default in Macromolecules mode | ||
* [#4431](https://github.com/epam/ketcher/issues/4431) – Implement support of unresolved IDT monomers | ||
* [#4382](https://github.com/epam/ketcher/issues/4382) – Implement support of unsplit nucleotides | ||
* [#3532](https://github.com/epam/ketcher/issues/3532) – Displaying side chain connections in snake-like mode | ||
* [#4856](https://github.com/epam/ketcher/issues/4856) – Add new CHEM monomers to the library | ||
* [#2654](https://github.com/epam/ketcher/issues/2654) – Improve WASM loading performance | ||
* [#5083](https://github.com/epam/ketcher/issues/5083) – Update indigo to 1.22.0 in browser module | ||
|
||
### Bugfixes and improvements | ||
* [#4660](https://github.com/epam/ketcher/issues/4660) – Zero charge shows explicit 0 instead of blank after using A+/A- Tools | ||
* [#4801](https://github.com/epam/ketcher/issues/4801) – Cut operation for attachment points makes canvas inaccessible/unoperational and delete entire molecule | ||
* [#4636](https://github.com/epam/ketcher/issues/4636) – In the Sequence mode, when selecting elements on the canvas, the total number of elements is not displayed in the Right-click menu | ||
* [#4686](https://github.com/epam/ketcher/issues/4686) – After moving the structure in the Macro mode, in the Micro mode the S-group value is displayed separately from the structure | ||
* [#4823](https://github.com/epam/ketcher/issues/4823) – In sequence mode, each press adds two characters and when deleted, also removes two | ||
* [#4793](https://github.com/epam/ketcher/issues/4793) – Context menu for attachment point labels should contain only Delete option | ||
* [#4784](https://github.com/epam/ketcher/issues/4784) – Attachment point enumeration logic works wrong | ||
* [#4786](https://github.com/epam/ketcher/issues/4786) – Keyboard shortcut stops working after adding/removing attachment point | ||
* [#4607](https://github.com/epam/ketcher/issues/4607) – Inconsistent display of a separate phosphate in the sequence representation in the Sequence mode | ||
* [#4782](https://github.com/epam/ketcher/issues/4782) – It is possible to attach bond to attachment point label | ||
* [#4791](https://github.com/epam/ketcher/issues/4791) – System saves selection states of attachment point labels to KET file (it should not) | ||
* [#4837](https://github.com/epam/ketcher/issues/4837) – Library filter does not reset when switching between Micro and Macro mode | ||
* [#4833](https://github.com/epam/ketcher/issues/4833) – Support rendering multiple Ketcher editors on a page without an iframe | ||
* [#4773](https://github.com/epam/ketcher/issues/4773) – It is impossible to apply R-group to atom with attachment point attached | ||
* [#4927](https://github.com/epam/ketcher/issues/4927) – Able to change attachment point label to an atom if it is selected first | ||
* [#4925](https://github.com/epam/ketcher/issues/4925) – Unable to change atom to another if molecule has attachment point | ||
* [#4929](https://github.com/epam/ketcher/issues/4929) – System allow to change atoms inside S-group without removing abbreviation | ||
* [#4930](https://github.com/epam/ketcher/issues/4930) – Fix missing IDT aliases and label positioning for unsplit nucleotides | ||
* [#4889](https://github.com/epam/ketcher/issues/4889) – After using "Clear Canvas" in the Sequence mode and entering new sequence, extra structures are shown in Flex and Snake modes | ||
* [#4924](https://github.com/epam/ketcher/issues/4924) – RNA Preset without Base causes constant crash after switching to Macromolecules mode | ||
* [#4977](https://github.com/epam/ketcher/issues/4977) – System doesn't show side chain bonds if chain loaded directly to Snake-mode canvas | ||
* [#4997](https://github.com/epam/ketcher/issues/4997) – The second of three horizontal bond overlaps backbone connection line | ||
* [#4975](https://github.com/epam/ketcher/issues/4975) – Connection is displayed at the bottom of the row, if drag a horizontal side-chain connection between the extreme nucleotides of a row | ||
* [#5035](https://github.com/epam/ketcher/issues/5035) – Bonds in the snake chain are displayed differently after saving in ket format | ||
* [#5034](https://github.com/epam/ketcher/issues/5034) – When dragging the side chain connections between CHEM, all these connections pass exclusively from the left, and not the shortest path | ||
* [#4881](https://github.com/epam/ketcher/issues/4881) – When switching from Sequence mode to Flex mode, RNA abbreviations remain | ||
* [#4995](https://github.com/epam/ketcher/issues/4995) – The bottom horizontal bonds does not shift if there is an overlap | ||
* [#5074](https://github.com/epam/ketcher/issues/5074) – Switching from Sequence mode to Snake mode and back shifts visible area of canvas beyond visible frame. Forever. | ||
* [#5121](https://github.com/epam/ketcher/issues/5121) – Copy does not work in the Firefox browser | ||
* [#5335](https://github.com/epam/ketcher/issues/5335) - The application crashes when selecting Enhanced Stereochemistry from the right-click menu |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,47 @@ | ||
|
||
# Ketcher 2.24.0 | ||
|
||
## What's Changed | ||
|
||
Here are the updated release notes with links to the corresponding issues: | ||
|
||
### New features | ||
* [#4878](https://github.com/epam/ketcher/issues/4878) – Add/Replace monomer in sequence mode from library | ||
* [#4880](https://github.com/epam/ketcher/issues/4880) – Adjust previews – add APs, show IDT aliases for previews in sequence mode, increase debounce time | ||
* [#4888](https://github.com/epam/ketcher/issues/4888) – Enable editing sequences by click between symbols | ||
* [#4887](https://github.com/epam/ketcher/issues/4887) – Starting new sequences with "Plus" icon on canvas | ||
* [#4780](https://github.com/epam/ketcher/issues/4780) – Remove monomers from the library (Peptides and CHEMs) | ||
* [#5167](https://github.com/epam/ketcher/issues/5176) – Change natural analogue of monomers Peptides and CHEMs) | ||
* [#4787](https://github.com/epam/ketcher/issues/4787) – Change structure of monomers (Peptides and CHEMs) | ||
* [#5166](https://github.com/epam/ketcher/issues/5166) – Change symbols of monomers (Peptides and CHEMs) | ||
* [#4781](https://github.com/epam/ketcher/issues/4781) – Change names of monomers (Peptides and CHEMs) | ||
* [#4905](https://github.com/epam/ketcher/issues/4905) – Open Edit Connection Points dialog via right click on bond | ||
* [#4911](https://github.com/epam/ketcher/issues/4911) – Insert image from ket to canvas | ||
* [#4897](https://github.com/epam/ketcher/issues/4897) – Insert image to canvas via "Add image" tool, Select, Move and Scale the image | ||
* [#4981](https://github.com/epam/ketcher/issues/4981) – Support for SSR | ||
* [#4979](https://github.com/epam/ketcher/issues/4979) – Support for Strict mode | ||
* [#5190](https://github.com/epam/ketcher/issues/5190) – Include Indigo without render module into ketcher-standalone build process | ||
* [#5284](https://github.com/epam/ketcher/issues/5284) – Update Indigo to 1.23.0 in browser module | ||
|
||
### Bugfixes and improvements | ||
* [#4763](https://github.com/epam/ketcher/issues/4763) – It is possible to create forbidden RNA preset | ||
* [#4962](https://github.com/epam/ketcher/issues/4962) – Bond tool and Erase tool buttons have to be disabled in Sequence mode (since they are not applicable) | ||
* [#4659](https://github.com/epam/ketcher/issues/4659) – Export result SVG contains some labels that are selectable | ||
* [#4108](https://github.com/epam/ketcher/issues/4108) – There are no tooltips when hovering over each of the sequence modes | ||
* [#4806](https://github.com/epam/ketcher/issues/4806) – It is allowed to change bond type between micro and macro | ||
* [#4936](https://github.com/epam/ketcher/issues/4936) – Applying Enhanced Stereochemistry to monomers causes its disappear from the canvas (and exception in console) | ||
* [#5090](https://github.com/epam/ketcher/issues/5090) – The favorites icon overlaps unsplit nucleotide names in the RNA and favorites tab | ||
* [#4947](https://github.com/epam/ketcher/issues/4947) – Distance between unresolved monomer and preview tooltip is too large and it has no IDT alias | ||
* [#4957](https://github.com/epam/ketcher/issues/4957) – Disabled query features in extended table not disabled in right-click menu | ||
* [#5126](https://github.com/epam/ketcher/issues/5126) – The error appears in the Console, when connecting two unsplit nucleotides in Snake mode | ||
* [#4069](https://github.com/epam/ketcher/issues/4069) – Right-click context menu protrudes beyond edges of the Ketcher workspace | ||
* [#4806](https://github.com/epam/ketcher/issues/4806) – It is allowed to change bond type between micro and macro | ||
* [#5196](https://github.com/epam/ketcher/issues/5196) – An error appears in the Console when opening any section in the RNA tab | ||
* [#5242](https://github.com/epam/ketcher/issues/5242) – Replace phosphate at the end with peptide causes cycled polymer | ||
* [#5184](https://github.com/epam/ketcher/issues/5184) – Fix unresolved monomers bond establishing issue | ||
* [#4935](https://github.com/epam/ketcher/issues/4935) – Enumeration is missing for cycled unsplit nucleotides after load from file (KET/MOL doesn't matter) | ||
* [#5255](https://github.com/epam/ketcher/issues/5255) – Fix adding new monomers to canvas in sequence mode while editing RNA in builder | ||
* [#5245](https://github.com/epam/ketcher/issues/5245) – Replacement of peptide at the end of sequence on preset w/out base works wrong | ||
* [#5228](https://github.com/epam/ketcher/issues/5228) – System insert monomer from the library to the canvas even if it shouldn't (and error message is wrong) | ||
* [#5300](https://github.com/epam/ketcher/issues/5300) – Attempt to insert improper monomer from the library to the sequence causes wrong error | ||
* [#5301](https://github.com/epam/ketcher/issues/5301) – New preset creation process interferes with monomer replacement on the sequence mode |
Oops, something went wrong.