Merge pull request #43 from fmalmeida/dev

Hotfix: v2.7.1

Merge pull request #38 from fmalmeida/dev

Wrap up version v2.7.0 for release

Merge pull request #35 from fmalmeida/dev

Release v2.6.3

Fix version number and changelog (#29)

Fix version number and CHANGELOG

Release v2.6.1 (#23)

* avoid running on empty lines

* update docker image to named all possible tool versions and update to v2.6

* fix missing meta

* allow illumina or bgiseq

* fixed fasterq-dump

* update changelog

* 21 add citation information (#22)

* Create CITATION.cff

* Update CITATION.cff

* Update CITATION.cff

* Update CITATION.cff

* update docs to have citations

* update citation console message

* update changelog

* update version information

* small fix on pacbio download from sra

Bump new version: v2.6 (#20)

* avoid running on empty lines

* update docker image to named all possible tool versions and update to v2.6

* fix missing meta

* allow illumina or bgiseq

* fixed fasterq-dump

* update changelog

Add option for using SRA Run IDs (#15)

* add modules for sra fetch and test conf

* fix label resources

* add gitpod starter

* SRA inclusion fixed for ILLUMINA data

* fix module tag

* fixed nanopore workflow for SRA and Local files

* workflow fixed, now all techs are running properly

* remove .view()

* update test config

* update index.html docs

* fix indentation

* update manual with --sra_ids information

* add info about test profile

* fix channels when SRA ids are not used

* on pacbio, barcode input should be file() as it is optional

* fix URL

* avoid using fixOwnership

* update comment

* small changes on namings and conventions

* fixed list of tools and changelog

* Adding date to changelog

Update fastp.nf

Forcing minor update of docs

Create .zenodo.json

adding zenodo info