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@github-actions github-actions released this 09 Sep 14:44
· 1575 commits to master since this release
1.7.0
64cd19e

Commits

  • b243341: Add new rules for the different human assemblies (hg19, hg38, T2T) (Thomas Weber) #11
  • 94f0f1a: Solve small issue on handle_input_data.py (Thomas Weber)
  • 5e61cec: Docs and local profiles (Thomas Weber) #10
  • 4a2fe72: Docs and local profiles (Thomas Weber) #10
  • 7ae1693: Docs and local profiles (Thomas Weber) #10
  • 356aed4: Docs and local profiles (Thomas Weber) #10
  • ab8c230: Docs and local profiles (Thomas Weber) #10
  • b2db31c: Docs and local profiles (Thomas Weber) #10
  • 001f7cd: Many changes related to ref genomes (Thomas Weber) #11
  • b224348: Major update: (Thomas Weber) #11
  • 0b99279: Major update: (Thomas Weber) #11
  • 6ab62f2: Major update: (Thomas Weber) #11
  • def323b: Major update: (Thomas Weber) #11
  • 36f5928: Major update: (Thomas Weber) #11
  • 8d3de43: Major update: (Thomas Weber) #11
  • feb013f: Major update: (Thomas Weber) #11
  • 39c385a: Major update: (Thomas Weber) #11
  • cd31c86: Major update: (Thomas Weber) #11
  • f989c08: Major update: (Thomas Weber) #11
  • 3732ad0: Major update: (Thomas Weber) #11
  • b69db6e: Detect Single/Paired end sample (Thomas Weber) #11
  • 107c594: Detect Single/Paired end sample (Thomas Weber) #11
  • d0aff87: Detect Single/Paired end sample (Thomas Weber) #11
  • 10eaf25: Detect Single/Paired end sample (Thomas Weber) #11
  • 2351c24: Detect Single/Paired end sample (Thomas Weber) #11
  • c6c9c1d: Detect Single/Paired end sample (Thomas Weber) #11
  • 2c93e98: Detect Single/Paired end sample (Thomas Weber) #11
  • 72d25b4: Detect Single/Paired end sample (Thomas Weber) #11
  • f844a73: Solve paired_end issue: automatic detection of single/paired end in BAM files (Thomas Weber) #11
  • 19e75ed: Solve paired_end issue: automatic detection of single/paired end in BAM files (Thomas Weber) #11
  • aee7334: Solve paired_end issue: automatic detection of single/paired end in BAM files (Thomas Weber) #11
  • 6d27e7a: Docs (Thomas Weber) #11
  • 3f3d916: Linting & Formatting (Thomas Weber) #11
  • b86d08c: Linting & Formatting (Thomas Weber) #11
  • 5aee279: (Re-)Added normalization parts (Thomas Weber) #11
  • 299878f: (Re-)Added normalization parts (Thomas Weber) #11
  • 6b25be0: (Re-)Added normalization parts (Thomas Weber) #11
  • 5b5b7a6: (Re-)Added normalization parts (Thomas Weber) #11
  • 87703ae: (Re-)Added normalization parts (Thomas Weber) #11
  • c1f41ce: (Re-)Added normalization parts (Thomas Weber) #11
  • 07fca57: (Re-)Added normalization parts (Thomas Weber) #11
  • 7333e8d: (Re-)Added normalization parts (Thomas Weber) #11
  • 548b905: (Re-)Added normalization parts (Thomas Weber) #11
  • 30763d0: Merge branch 'master' into ref_genomes (Thomas Weber) #11
  • 1c62749: README issue (Thomas Weber)
  • e6a3e76: README issue (Thomas Weber)
  • 81f5f6a: README issue (Thomas Weber)
  • 5aeae65: README issue (Thomas Weber)
  • b8afff5: Corrections (Thomas Weber)
  • 4edd604: Snakemake log tests (Thomas Weber) #12
  • 6940e8e: Corrections (Thomas Weber)
  • 770bfd9: Solve small issues (strandphaser single-cell haps comparison) (Thomas Weber)
  • 302f7b5: Solve stringent/lenient issue (filter = TRUE/FALSE) (Thomas Weber)
  • cb9a659: Merge branch 'master' into dev (Thomas Weber) #12
  • b82ba2b: Solve multi-sample issue (Thomas Weber) #12
  • 1e5d12c: Solve multi-sample issue (Thomas Weber) #12
  • 6f5c413: Cleaning (Thomas Weber) #12
  • b18b6b3: Solve multi-sample issue (Thomas Weber) #12
  • 8b2d291: Solve multi-sample issue (Thomas Weber) #12
  • 5a32bed: Solve multi-sample issue (Thomas Weber) #12
  • edb9b4b: Test debug (Thomas Weber) #12
  • 07050de: Test debug (Thomas Weber) #12
  • fa6e6de: Test debug (Thomas Weber) #12
  • 8065726: Test debug (Thomas Weber) #12
  • 92469f9: Test debug (Thomas Weber) #12
  • b16a3a2: Test debug (Thomas Weber) #12
  • 7c51082: Test debug (Thomas Weber) #12
  • b28ec25: Test debug (Thomas Weber) #12
  • 3e3a408: Test debug (Thomas Weber) #12
  • f1ede48: Test debug (Thomas Weber) #12
  • e3239eb: Test debug (Thomas Weber) #12
  • 3d43435: Test debug clustering (Thomas Weber) #12
  • a113ebf: Test debug ploidy (Thomas Weber) #12
  • 3e0fcf8: Test debug stats-merged (Thomas Weber) #12
  • 3da0b91: Test debug run-summary (Thomas Weber) #12
  • 7b54582: Test debug complex (Thomas Weber) #12
  • 6ea1658: Test debug complex2 (Thomas Weber) #12
  • 001160e: Test debug fastq (Thomas Weber) #12
  • 071ae2e: Test debug ; change envs (Thomas Weber) #12
  • 5d4eab4: Test debug ; change envs (Thomas Weber) #12
  • 7c88a5a: Test debug ; change envs (Thomas Weber) #12
  • 4a07f1a: Test debug (Thomas Weber) #12
  • df08a4b: Test debug (Thomas Weber) #12
  • 236b059: Test debug (Thomas Weber) #12
  • 928ad89: From chr21 to chr17 to solve issues (Thomas Weber) #12
  • 3d29e3f: From chr21 to chr17 to solve issues (Thomas Weber) #12
  • 55edaa3: From chr21 to chr17 to solve issues (Thomas Weber) #12
  • a0f4a8f: From chr21 to chr17 to solve issues (Thomas Weber) #12
  • b28955e: From chr21 to chr17 to solve issues (Thomas Weber) #12
  • 9e7f7a0: From chr21 to chr17 to solve issues (Thomas Weber) #12
  • 8bb08de: From chr21 to chr17 to solve issues (Thomas Weber) #12
  • 16c394e: From chr21 to chr17 to solve issues (Thomas Weber) #12
  • 02e6797: From chr21 to chr17 to solve issues (Thomas Weber) #12
  • 788ee61: Docker container (Thomas Weber)
  • 39d4211: Docker container (Thomas Weber)
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