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Add options filterUmisWithN and allowUmisWithDifferentLengths unit tests #1124: Commit 48a75fc pushed by TedBrookings
March 6, 2024 15:45 2m 7s tb-allow-different-len-umis
tb-allow-different-len-umis
March 6, 2024 15:45 2m 7s
Add options filterUmisWithNs and allowUmisWithDifferentLengths unit tests #1123: Commit f6e13f0 pushed by TedBrookings
March 6, 2024 15:31 2m 10s tb-allow-different-len-umis
tb-allow-different-len-umis
March 6, 2024 15:31 2m 10s
ZipperBams to produce mate score ("ms") for samtools markdup (#952) unit tests #1122: Commit 3a74fd2 pushed by nh13
February 9, 2024 15:35 7m 4s main
main
February 9, 2024 15:35 7m 4s
ZipperBams to produce mate score ("ms") for samtools markdup unit tests #1121: Pull request #952 synchronize by nh13
February 9, 2024 15:27 4m 58s nh13-patch-1
nh13-patch-1
February 9, 2024 15:27 4m 58s
add to the unit test a read with ms unit tests #1120: Commit 87e8288 pushed by nh13
February 9, 2024 15:27 4m 45s nh13-patch-1
nh13-patch-1
February 9, 2024 15:27 4m 45s
Fix typo in ExtractUmisFromBam.scala (#966) unit tests #1119: Commit 0a03aa9 pushed by nh13
February 1, 2024 18:37 7m 10s main
main
February 1, 2024 18:37 7m 10s
Fix typo in ExtractUmisFromBam.scala unit tests #1118: Pull request #966 opened by nh13
February 1, 2024 13:55 4m 42s nh13-patch-2
nh13-patch-2
February 1, 2024 13:55 4m 42s
Fix typo in ExtractUmisFromBam.scala unit tests #1117: Commit 7acaaaa pushed by nh13
February 1, 2024 13:55 4m 40s nh13-patch-2
nh13-patch-2
February 1, 2024 13:55 4m 40s
GroupReadsByUmi may fail when marking duplicates including secondary/supplementary reads unit tests #1116: Pull request #964 synchronize by nh13
January 31, 2024 21:37 4m 35s nh_markdup_order_issue
nh_markdup_order_issue
January 31, 2024 21:37 4m 35s
fix: properly template-coordinate sort and duplicate mark secondary a… unit tests #1115: Commit 1b5753c pushed by nh13
January 31, 2024 21:37 4m 33s nh_markdup_order_issue
nh_markdup_order_issue
January 31, 2024 21:37 4m 33s
fix: mapped header records should overwrite unmapped in ZipperBams (#… unit tests #1114: Commit 371db03 pushed by nh13
January 31, 2024 21:36 7m 13s main
main
January 31, 2024 21:36 7m 13s
fix: ensure that the GroupReadsByUmiTests for marking duplicates are … unit tests #1113: Commit d85efb9 pushed by nh13
January 30, 2024 01:21 6m 50s main
main
January 30, 2024 01:21 6m 50s
GroupReadsByUmi may fail when marking duplicates including secondary/supplementary reads unit tests #1112: Pull request #964 opened by nh13
January 30, 2024 01:16 4m 58s nh_markdup_order_issue
nh_markdup_order_issue
January 30, 2024 01:16 4m 58s
fix: properly template-coordinate sort and duplicate mark secondary a… unit tests #1111: Commit cd1460b pushed by nh13
January 30, 2024 01:12 4m 47s nh_markdup_order_issue
nh_markdup_order_issue
January 30, 2024 01:12 4m 47s
fix: mapped header records should overwrite unmapped in ZipperBams unit tests #1110: Pull request #963 opened by nh13
January 30, 2024 01:11 4m 56s feature/zipperbams-header
feature/zipperbams-header
January 30, 2024 01:11 4m 56s
fix: mapped header records should overwrite unmapped in ZipperBams unit tests #1109: Commit ef7f119 pushed by nh13
January 30, 2024 01:11 5m 5s feature/zipperbams-header
feature/zipperbams-header
January 30, 2024 01:11 5m 5s
fix: mapped header records should overwrite unmapped in ZipperBams unit tests #1108: Commit a7873a0 pushed by nh13
January 30, 2024 01:10 4m 38s feature/zipperbams-header
feature/zipperbams-header
January 30, 2024 01:10 4m 38s
fix: ensure that the GroupReadsByUmiTests for marking duplicates are unit tests #1107: Pull request #962 opened by nh13
January 29, 2024 22:39 4m 55s feature/ensure-markdup-tests-are-run
feature/ensure-markdup-tests-are-run
January 29, 2024 22:39 4m 55s
fix: ensure that the GroupReadsByUmiTests for marking duplicates are unit tests #1106: Commit a4cec0c pushed by nh13
January 29, 2024 22:39 4m 42s feature/ensure-markdup-tests-are-run
feature/ensure-markdup-tests-are-run
January 29, 2024 22:39 4m 42s
feat: add --umi-prefix to CopyUmiFromReadName unit tests #1105: Pull request #958 opened by msto
January 19, 2024 17:13 5m 18s ms_add-umi-prefix
ms_add-umi-prefix
January 19, 2024 17:13 5m 18s
feat: add --umi-prefix to CopyUmiFromReadName unit tests #1104: Commit c575dfc pushed by msto
January 19, 2024 17:13 4m 40s ms_add-umi-prefix
ms_add-umi-prefix
January 19, 2024 17:13 4m 40s
PileupBuilder should not report insertions when checking the final ma… unit tests #1103: Commit afa634e pushed by clintval
January 17, 2024 21:17 6m 44s main
main
January 17, 2024 21:17 6m 44s
PileupBuilder should not report insertions when checking the final mapped base before soft-clipping unit tests #1102: Pull request #956 synchronize by clintval
January 17, 2024 21:09 5m 9s jrm5100:bugfix-pileup-insertions
jrm5100:bugfix-pileup-insertions
January 17, 2024 21:09 5m 9s
PileupBuilder should not report insertions when checking the final mapped base before soft-clipping unit tests #1101: Pull request #956 synchronize by jrm5100
January 17, 2024 20:55 4m 15s jrm5100:bugfix-pileup-insertions
jrm5100:bugfix-pileup-insertions
January 17, 2024 20:55 4m 15s
PileupBuilder should not report insertions when checking the final mapped base before soft-clipping unit tests #1100: Pull request #956 opened by jrm5100
January 5, 2024 19:40 4m 47s jrm5100:bugfix-pileup-insertions
jrm5100:bugfix-pileup-insertions
January 5, 2024 19:40 4m 47s