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Release 2.1.0
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@tfenne tfenne released this 05 Jan 22:51
· 49 commits to main since this release
2.1.0
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tfenne Tim Fennell
GPG key ID: AB94D909E8F16C28
Learn about vigilant mode.

Minor release with mostly bug-fixes and one new tool.

New Tools

  • DownsampleAndNormalizeBam - performs semi-random downsampling to reduce coverage towards a specified target coverage while retaining reads in low-coverage areas. See #893

Bug Fixes

  • Fix overly aggressive overlap-clipping regressions in ClipBam by @jrm5100 in #850
  • ReviewConsensusVariants should not require grouped raw reads to by @nh13 in #860
  • Fix a bug where consensus reads are produced with zero depth by @nh13 in #859
  • Fix for nasty corner case described in issue #858 in CallDuplexConsensusReads by @nh13 in #864
  • Tweak the size of caches for parallel consensus calling down to reduce memory usage by @tfenne in #881

Minor Changes

  • Added ncRNA biotype to NCBI RefSeq GFF parser. by @tfenne in #854

Other

Full Changelog: 2.0.2...2.1.0

Contributors

nh13, tfenne, and jrm5100
Assets 3
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