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  1. pysb/pysb pysb/pysb Public

    Python framework for Systems Biology modeling

    Python 172 71

  2. LoLab-MSM/pysb-tutorials LoLab-MSM/pysb-tutorials Public

    PySB tutorials and examples for IPython (Jupyter) notebook

    Jupyter Notebook 10 6

  3. LoLab-MSM/pydyno LoLab-MSM/pydyno Public

    Tool that uses tropical algebra concepts to 'decompose' species trajectories in the protein-protein interactions that drive changes of concentration in time

    Jupyter Notebook 8 1

  4. FinleyLabUSC/Boolean_TCE_model FinleyLabUSC/Boolean_TCE_model Public

    R 2

  5. LoLab-MSM/NERM LoLab-MSM/NERM Public

    Jupyter Notebook 2

  6. QuLab-VU/Groves-CellSys2022 QuLab-VU/Groves-CellSys2022 Public

    Code and figures related to Groves et al. submitted to Cell Systems 2021

    Jupyter Notebook 2