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@genome

The McDonnell Genome Institute

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  1. gms Public archive

    The Genome Modeling System installer

    Perl 78 22

  2. bam-readcount Public

    Count bases in BAM/CRAM files

    CMake 314 96

  3. sciclone Public

    An R package for inferring the subclonal architecture of tumors

    R 117 55

  4. analysis-workflows Public

    Open workflow definitions for genomic analysis from MGI at WUSM.

    Common Workflow Language 103 58

  5. genome Public

    Core modules used by the GMS

    Perl 65 57

  6. bfx-workshop Public

    A course on genomics and bioinformatics from WU

    HTML 64 23

Repositories

Showing 10 of 172 repositories
  • bfx-workshop Public

    A course on genomics and bioinformatics from WU

    HTML 64 23 0 0 Updated Mar 3, 2025
  • analysis-workflows Public

    Open workflow definitions for genomic analysis from MGI at WUSM.

    Common Workflow Language 103 MIT 58 74 15 Updated Feb 17, 2025
  • docker-vep_helper-cwl Public
    Perl 0 3 1 0 Updated Dec 19, 2024
  • qc-analysis-pipeline Public Forked from gatk-workflows/five-dollar-genome-analysis-pipeline

    Workflow used for WGS/WES data QC

    WDL 8 BSD-3-Clause 44 9 0 Updated Oct 16, 2024
  • UR Public

    Rich Transactional Objects for Perl

    Perl 3 12 8 4 Updated Jun 15, 2024
  • snvstory Public Forked from nch-igm/snvstory

    Rapid and accurate ancestry inference using SNVs.

    Python 0 BSD-3-Clause 10 0 0 Updated May 8, 2024
  • cig-pipelines Public

    Workflows and resources for running pipelines for somatic mutation discovery in pangenomes plus miscellaneous tools..

    WDL 0 1 0 0 Updated Apr 19, 2024
  • spectacle Public
    Ruby 0 2 9 9 Updated Mar 25, 2024
  • genome Public

    Core modules used by the GMS

    Perl 65 LGPL-3.0 57 9 0 Updated Mar 13, 2024
  • cle-myeloseqhd Public
    Python 2 4 3 0 Updated Dec 20, 2023
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