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add watchmaker to strand settings table
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obigriffith committed Aug 19, 2024
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2 changes: 1 addition & 1 deletion _posts/0009-12-01-StrandSettings.md
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Expand Up @@ -35,7 +35,7 @@ There are various strand-related settings for RNA-seq tools that must be adjuste
| **MGI CWL YAML (`strand` parameter)** | `first` | `second` | NONE |
| **WASHU WDL YAML (`strand` parameter)** | `first` | `second` | `unstranded` |
| **RegTools (`strand` parameter)** | `-s RF` | `-s FR` | `-s XS` |
| **Example kits** | **Example methods/kits:** dUTP, NSR, NNSR, Illumina TruSeq Strand Specific Total RNA, NEBNext Ultra II Directional | **Example methods/kits:** Ligation, Standard SOLiD, NuGEN Encore, 10X 5’ scRNA data | **Example kits/data:** Standard Illumina, NuGEN OvationV2, SMARTer universal low input RNA kit (TaKara), GDC normalized TCGA data |
| **Example kits** | **Example methods/kits:** dUTP, NSR, NNSR, Illumina TruSeq Strand Specific Total RNA, NEBNext Ultra II Directional, Watchmaker RNA Library Prep Kit with Polaris Depletion | **Example methods/kits:** Ligation, Standard SOLiD, NuGEN Encore, 10X 5’ scRNA data | **Example kits/data:** Standard Illumina, NuGEN OvationV2, SMARTer universal low input RNA kit (TaKara), GDC normalized TCGA data |

### Notes

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