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Gammerdinger authored Sep 27, 2024
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# Intro-to-Unix-QMB
## BMI 713 - Computing Skills for Biomedical Sciences

Lessons, scripts and Slides for Day 4 of the [QMB course](https://hms-dbmi.github.io/qmb-2016/) (August 2016).
### Description
Many data analysis tools require users to have a basic working knowledge of the command line interface (also referred to as *UNIX, Linux, bash, shell*). They also may require the user to have access to resources (i.e. memory, CPU, storage) that exceed what is typically acessible on a personal computer or laptop. In this session, participants will:

* Learn basic shell commands for navigating the file system
* Explore file contents
* Perform basic operations, such as moving, copying, renaming files/folders
* Learn how to use HMS-RC's O2 cluster for high-performance computing (HPC)

### Dataset
The dataset which is used in the pre-reading activities can be found at the link below. Note, **more detailed instructions for dataset download are found in the pre-reading below.**

* [Introduction to Shell: Dataset](https://github.com/hbctraining/Training-modules/blob/master/Intro_shell/data/unix_lesson.zip?raw=true)

### Installation Requirements

***Mac users:***
No installation requirements.

***Windows users:***
[GitBash](https://git-scm.com/download/win)

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