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Test raises in NormalField #758

Test raises in NormalField

Test raises in NormalField #758

# This file is based on examples in
# https://docs.github.com/en/actions/language-and-framework-guides/using-python-with-github-actions
# Note that all the "sudo" commands here appear to cause a warning message
# "sudo: setrlimit(RLIMIT_CORE): operation not permitted"
# This appears to be a known harmless annoyance:
# https://gitlab.alpinelinux.org/alpine/aports/-/issues/11122
name: Tests with no XSIMD
on:
push:
branches-ignore: [master]
tags-ignore: [v*]
pull_request:
branches-ignore: [master]
jobs:
test:
runs-on: ubuntu-latest
env:
OMPI_ALLOW_RUN_AS_ROOT: 1
OMPI_ALLOW_RUN_AS_ROOT_CONFIRM: 1
NO_XSIMD: 1
strategy:
fail-fast: false
matrix:
python-version: [3.9]
steps:
# First print out lots of information. We do this in separate
# "name" blocks because otherwise the output gets mixed together
# in the github actions log.
- name: Print user and group id
run: |
set -ex
id
- name: PWD
run: |
set -ex
pwd
- name: ls -l
run: |
set -ex
ls -l
- name: apt-get stuff needed for libstell and vmec
run: |
sudo apt-get update
sudo apt-get install -y build-essential gfortran openmpi-bin libopenmpi-dev libnetcdf-dev libnetcdff-dev liblapack-dev libscalapack-mpi-dev libhdf5-dev libhdf5-serial-dev git m4 libfftw3-dev libboost-all-dev libopenblas-dev
- uses: actions/checkout@v4
- name: Fetch all history for all tags
run: git fetch --all --tags --prune --unshallow
- name: ls -l again
run: |
set -ex
ls -l
pwd
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
- name: which python3 after python setup
run: which python3
- name: which pip after python setup
run: |
python -m pip install --upgrade pip
pip --version
- name: env after adding python
run: env
- name: Install python dependencies
run: |
sudo apt-get install graphviz graphviz-dev
pip install wheel "numpy<2.0.0" scipy f90nml h5py scikit-build cmake qsc sympy pyevtk matplotlib ninja plotly networkx pygraphviz ground bentley_ottmann
- name: Install booz_xform
run: pip install -v git+https://github.com/hiddenSymmetries/booz_xform
- name: Install virtual_casing
run: pip install -v git+https://github.com/hiddenSymmetries/virtual-casing
- name: ls in /usr/lib/x86_64-linux-gnu
run: ls -l /usr/lib/x86_64-linux-gnu
- name: Add to LD_LIBRARY_PATH so scalapack etc can be found
run: echo "LD_LIBRARY_PATH=/usr/lib/x86_64-linux-gnu" >> $GITHUB_ENV
- name: env after adding to LD_LIBRARY_PATH
run: env
- name: Install simsopt package
run: env CMAKE_BUILD_TYPE=Debug pip install -v .[MPI]
- name: Verify that importing simsopt does not automatically initialize MPI
run: ./tests/verify_MPI_not_initialized.py
- name: Run examples as part of integrated tests
run: |
cd examples
./run_serial_examples
./run_parallel_examples
- name: Run tests on 1 process
run: |
python -m unittest discover -t tests -v -s tests/field
python -m unittest discover -t tests -v -s tests/geo
python -m unittest discover -t tests -v -s tests/objectives
- name: Run MPI tests
run: |
mpiexec -n 2 python -m unittest discover -k "mpi" -s tests -v