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Rewriten finite difference logging #283

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Rewriten finite difference logging #283

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Commits on Nov 3, 2022

  1. Added an objective to take precalculated values of another objective. 

    This new objective wraps the other objective, but uses the precalculated values to evaluate points close to the precalculated points.
The intended usage is to quickly redo parts of an optimization, that got interrupted due to for example time limits.
    Stefan Buller committed Nov 3, 2022
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  2. Merge branch 'master' into precalculated_objective

    Stefan Buller committed Nov 3, 2022
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Commits on Dec 22, 2022

  1. Merge branch 'master' into finite_difference_log

    Stefan Buller committed Dec 22, 2022
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  2. Rewrote jacobian logger to be more agnostic to whether the problem is… 

    … a least squares problem or generic.

Updated the "general" solver in serial.
    Stefan Buller committed Dec 22, 2022
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  3. Some small tweaks to work better with MPI (hopefully)

    Stefan Buller committed Dec 22, 2022
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  4. Fixed printing for big arrays

    daringli committed Dec 22, 2022
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  5. Bugfix

    daringli committed Dec 22, 2022
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  6. Reverted jacobian to only print the derivative of the total objective. 

    No longer useful for reseting the least squares optimizer, but that wasn't a good default due to the 1000s of residuals in the QS objective.
    daringli committed Dec 22, 2022
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  7. Added missing newline

    daringli committed Dec 22, 2022
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  8. Added non-least-squares case

    daringli committed Dec 22, 2022
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Commits on Jan 10, 2023

  1. Updated jacobian logging to also support the legacy option (which is … 

    …the default).
    Stefan Buller committed Jan 10, 2023
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Commits on Jan 11, 2023

  1. f0 is now calculated inside the finite difference object to avoid dup… 

    …licate work and because calling fd.fn() in the logger resulted in the execution freezing on cobra.
    Stefan Buller committed Jan 11, 2023
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  2. Fixed linting errors.

    Stefan Buller committed Jan 11, 2023
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  3. Moved some code around. Renamed 'wrapper' to decorator to conform to … 

    …python nomenclature.
    Stefan Buller committed Jan 11, 2023
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  4. Fixed an error where the FiniteDifference object would not update its… 

    … DOFs if the underlying optimizable got updated.
    Stefan Buller committed Jan 11, 2023
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  5. Reverted some changes not related to the feature of this branch.

    Stefan Buller committed Jan 11, 2023
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