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@igvteam

igvteam

Github repository for the Integrative Genomics Viewer (IGV) team.

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  1. igv.js igv.js Public

    Embeddable genomic visualization component based on the Integrative Genomics Viewer

    HTML 664 231

  2. igv-webapp igv-webapp Public

    IGV Web App

    JavaScript 120 44

  3. igv igv Public

    Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations

    Java 658 387

  4. igv-reports igv-reports Public

    Python application to generate self-contained pages embedding IGV visualizations, with no dependency on original input files.

    Python 355 55

  5. igv-notebook igv-notebook Public

    Module for embedding igv.js in an IPython notebook

    JavaScript 73 13

  6. juicebox.js juicebox.js Public

    HiC contact matrix visualization

    JavaScript 19 14

Repositories

Showing 10 of 37 repositories
  • igv-docs Public

    Markdown-based documentation website - IGV desktop application

    igvteam/igv-docs’s past year of commit activity
    JavaScript 6 1 1 0 Updated Mar 1, 2025
  • spacewalk Public

    Spacewalk is an application for displaying and interacting with super-resolution chromatin tracing data in 3D. SpaceWalk includes igv.js and juicebox.js instances for rapid and intuitive visual comparison and interaction between 3D data and 1D genomic data.

    igvteam/spacewalk’s past year of commit activity
    JavaScript 10 MIT 1 1 0 Updated Feb 28, 2025
  • igv Public

    Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations

    igvteam/igv’s past year of commit activity
    Java 658 MIT 387 171 0 Updated Feb 28, 2025
  • igv-webapp Public

    IGV Web App

    igvteam/igv-webapp’s past year of commit activity
    JavaScript 120 MIT 44 3 0 Updated Feb 27, 2025
  • igv.js Public

    Embeddable genomic visualization component based on the Integrative Genomics Viewer

    igvteam/igv.js’s past year of commit activity
    HTML 664 MIT 231 68 1 Updated Feb 25, 2025
  • juicebox.js Public

    HiC contact matrix visualization

    igvteam/juicebox.js’s past year of commit activity
    JavaScript 19 MIT 14 21 0 Updated Feb 13, 2025
  • igv-notebook Public

    Module for embedding igv.js in an IPython notebook

    igvteam/igv-notebook’s past year of commit activity
    JavaScript 73 MIT 13 4 0 Updated Feb 7, 2025
  • juicebox-web Public
    igvteam/juicebox-web’s past year of commit activity
    JavaScript 3 2 3 0 Updated Feb 3, 2025
  • hic-straw Public

    Command line and web utilities for reading .hic contact matrix files

    igvteam/hic-straw’s past year of commit activity
    JavaScript 8 MIT 4 0 0 Updated Feb 3, 2025
  • igv-reports Public

    Python application to generate self-contained pages embedding IGV visualizations, with no dependency on original input files.

    igvteam/igv-reports’s past year of commit activity
    Python 355 MIT 55 4 2 Updated Dec 21, 2024
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