Toevoegen functionaliteit texture_parsing met 1 staal (ander formaat)…

… + 1 script per functie voor texture parsing scripts (beginnend met txtp_) + aanpassen documentatie om R CMD CHECK zonder NOTE te kunnen lopen

DESCRIPTION

@@ -1,8 +1,8 @@
 Type: Package
 Package: inbolims
 Title: Utilities to query the INBO lab analysis datawarehouse
-Version: 0.2.9
-Date: 2023-12-08
+Version: 0.2.10
+Date: 2024-06-17
 Authors@R: 
     person("Pieter", "Verschelde", , "[email protected]", role = c("aut", "cre"),
            comment = c(ORCID = "0000-0002-9199-421X", affiliation = "Research Institute for Nature and Forest (INBO)"))
@@ -14,27 +14,26 @@ License: GPL-3
 URL: https://github.com/inbo/inbolims, https://inbo.github.io/inbolims/
 BugReports: https://github.com/inbo/inbolims/issues
 Depends:
-    R (>= 3.5.0)
+    R (>= 4.0.0)
 Imports:
     DBI,
     dplyr,
     ggplot2,
     magrittr,
     odbc,
-    purrr,
     readr,
     RODBC,
     stats,
-    tidyr,
-    tidyverse
+    stringr,
+    tidyr
 Suggests:
     knitr,
     rmarkdown,
-    testthat (>= 2.1.0)
+    testthat (>= 3.0.0)
 VignetteBuilder: 
     knitr
 Config/checklist/communities: inbo
 Config/checklist/keywords: lims; lab results; COA; Certificate of Analysis
 Encoding: UTF-8
 Language: nl-BE
-RoxygenNote: 7.2.3
+RoxygenNote: 7.3.1

NAMESPACE

@@ -3,15 +3,12 @@
 export(create_archief_labels_bat)
 export(date_as_text)
 export(get_all_report_fields)
-export(get_available_report_fields)
 export(get_report_config_info)
-export(interprate_texture_content)
+export(interprete_texture_content)
 export(lims_connect)
-export(lims_measured_parameters)
 export(lims_report_export)
 export(lims_report_samples)
 export(lims_report_xtab)
-export(lims_report_xtab_old)
 export(lims_result_statistics)
 export(link_labo_id)
 export(parse_sql_report_query)
@@ -23,7 +20,6 @@ import(dplyr)
 import(magrittr)
 importFrom(DBI,dbGetQuery)
 importFrom(RODBC,odbcDriverConnect)
-importFrom(dplyr,"%>%")
 importFrom(dplyr,filter)
 importFrom(dplyr,lead)
 importFrom(dplyr,mutate)
@@ -40,11 +36,11 @@ importFrom(ggplot2,rel)
 importFrom(ggplot2,scale_y_log10)
 importFrom(ggplot2,theme)
 importFrom(ggplot2,xlab)
-importFrom(purrr,"%||%")
 importFrom(readr,read_delim)
 importFrom(readr,read_tsv)
 importFrom(readr,write_excel_csv2)
 importFrom(stats,quantile)
+importFrom(stringr,str_split_1)
 importFrom(tidyr,pivot_longer)
 importFrom(tidyr,pivot_wider)
 importFrom(tidyr,separate)

R/inbolims-package.R

@@ -0,0 +1,10 @@
+#' @keywords internal
+"_PACKAGE"
+
+## usethis namespace: start
+## usethis namespace: end
+NULL
+
+## quiets concerns of R CMD check re: the .'s that appear in pipelines
+if (getRversion() >= "2.15.1") utils::globalVariables(c("."))
+