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1. SynD SynD Public

   Library for easily creating and using highly efficient, arbitrarily complex synthetic dynamics models

   Python 3 2

2. SynD-Examples SynD-Examples Public

   Examples for synthetic dynamics

   Jupyter Notebook 4

3. mr_toolkit mr_toolkit Public

   Tools for estimating and analyzing reweighted Markov models from MD data.

   Python

4. msm_we msm_we Public

   History-augmented Markov analysis of weighted ensemble trajectories.

   Python 7 7

5. westpa westpa Public

   Forked from westpa/westpa

   WESTPA: The Weighted Ensemble Simulation Toolkit with Parallelization and Analysis

   Python 2

6. remote_thermostat remote_thermostat Public

   man i hate being cold

   Python