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jfkonecn committed Feb 24, 2025
1 parent 96bfd74 commit 14a7fb7
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Showing 6 changed files with 53 additions and 27 deletions.
2 changes: 1 addition & 1 deletion src/main/webapp/app/config/constants.tsx
Original file line number Diff line number Diff line change
Expand Up @@ -866,7 +866,7 @@ export type DataRelease = {
};

export const DATA_RELEASES: DataRelease[] = [
{ date: '02302025', version: 'v4.26' },
{ date: '02252025', version: 'v4.26' },
{ date: '01302025', version: 'v4.25' },
{ date: '12192024', version: 'v4.24' },
{ date: '11262024', version: 'v4.23' },
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1 change: 0 additions & 1 deletion src/main/webapp/app/pages/newsPage/NewsList.tsx
Original file line number Diff line number Diff line change
Expand Up @@ -19,7 +19,6 @@ import HashLink from 'app/shared/links/HashLink';
import { RouterStore } from 'mobx-react-router';
import { observable } from 'mobx';
import { observer } from 'mobx-react';
import NewsContent01302025 from './code-generated/NewsContent01302025';

export type NewsListProps = {
date: string;
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2 changes: 1 addition & 1 deletion src/main/webapp/app/pages/newsPage/NewsPage.tsx
Original file line number Diff line number Diff line change
Expand Up @@ -86,7 +86,7 @@ export default class NewsPage extends React.Component<{
<CitationText />
</div>
<div className="mt-2">
<NewsList date={'02282025'} />
<NewsList date={'02252025'} />
<NewsList date={'01302025'} />
<NewsList date={'12192024'} />
<NewsList date={'11262024'} />
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4 changes: 2 additions & 2 deletions src/main/webapp/app/pages/newsPage/NewsPageContent.tsx
Original file line number Diff line number Diff line change
Expand Up @@ -45,7 +45,7 @@ import { PMALink } from 'app/shared/links/PMALink';
import OptimizedImage from 'app/shared/image/OptimizedImage';
import { AnnotationColumnHeaderType } from './ChangedAnnotationListItem';
import { linkableMutationName, convertGeneInputToLinks } from './Util';
import NewsContent022025 from './code-generated/NewsContent022025';
import NewsContent022025 from './code-generated/NewsContent022525';

export type ChangedAnnotation = {
content: (ElementType | ElementType[])[][];
Expand Down Expand Up @@ -303,7 +303,7 @@ const EVIDENCE_COLUMN_SEPARATOR = '; ';
// https://stackoverflow.com/questions/41947168/is-it-possible-to-use-keyof-operator-on-literals-instead-of-interfaces

export const NEWS_BY_DATE: { [date: string]: NewsData } = {
'02282025': {
'02252025': {
rawComponent: <NewsContent022025 />,
},
'01302025': {
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Original file line number Diff line number Diff line change
Expand Up @@ -6,7 +6,7 @@ import {
} from 'app/shared/utils/UrlUtils';
import { NewlyAddedGenesListItem } from 'app/pages/newsPage/NewlyAddedGenesListItem';

export default function NewsContent022025() {
export default function NewsContent022525() {
return (
<>
<ul>
Expand Down Expand Up @@ -39,11 +39,14 @@ export default function NewsContent022025() {
</td>
<td>Pancreatic Cancer</td>
<td>
<em>Drug(s) promoted in OncoKB™:</em> Erdafitnib (Level 2,
previously Level 4)
<em>Drug(s) promoted in OncoKB™:</em>
<br />
Erdafitnib (Level 2, previously Level 4)
<br />
<em>Drug(s) remaining in OncoKB™:</em> Fexagratinib (Level 4)
<br />
<em>Drug(s) remaining in OncoKB™:</em>
<br />
Fexagratinib (Level 4)
</td>
<td>4</td>
<td>2</td>
Expand All @@ -62,11 +65,14 @@ export default function NewsContent022025() {
</td>
<td>Pancreatic Cancer</td>
<td>
<em>Drug(s) promoted in OncoKB™:</em> Erdafitnib (Level 2,
previously Level 4)
<em>Drug(s) promoted in OncoKB™:</em>
<br />
Erdafitnib (Level 2, previously Level 4)
<br />
<br />
<em>Drug(s) remaining in OncoKB™:</em>
<br />
<em>Drug(s) remaining in OncoKB™:</em> Fexagratinib (Level 4)
Fexagratinib (Level 4)
</td>
<td>4</td>
<td>2</td>
Expand All @@ -85,12 +91,14 @@ export default function NewsContent022025() {
</td>
<td>Non-Small Cell Lung Cancer</td>
<td>
<em>Drug(s) promoted in OncoKB™:</em> Erdafitnib (Level 2,
previously Level 4)
<em>Drug(s) promoted in OncoKB™:</em>
<br />
Erdafitnib (Level 2, previously Level 4)
<br />
<em>Drug(s) remaining in OncoKB™:</em> Fexagratinib,
Lirafugratinib (Level 4)
<br />
<em>Drug(s) remaining in OncoKB™:</em>
<br />
Fexagratinib, Lirafugratinib (Level 4)
</td>
<td>4</td>
<td>2</td>
Expand All @@ -110,11 +118,14 @@ export default function NewsContent022025() {
</td>
<td>Non-Small Cell Lung Cancer</td>
<td>
<em>Drug(s) promoted in OncoKB™:</em> Erdafitnib (Level 2,
previously Level 4)
<em>Drug(s) promoted in OncoKB™:</em>
<br />
Erdafitnib (Level 2, previously Level 4)
<br />
<br />
<em>Drug(s) remaining in OncoKB™:</em>
<br />
<em>Drug(s) remaining in OncoKB™:</em> Fexagratinib (Level 4)
Fexagratinib (Level 4)
</td>
<td>4</td>
<td>2</td>
Expand Down Expand Up @@ -171,10 +182,20 @@ export default function NewsContent022025() {
</tbody>
</table>
</div>
<h4></h4>
<ul>
<li>
<NewlyAddedGenesListItem
genes={['ALOX5', 'APEX1', 'RPS6KB1', 'TACSTD2']}
genes={[
'ALOX5',
'APEX1',
'CBLB',
'DHX15',
'POLH',
'RPS6KB1',
'TACSTD2',
'WEE1',
]}
></NewlyAddedGenesListItem>
</li>
</ul>
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Original file line number Diff line number Diff line change
@@ -1,20 +1,26 @@
- Updated Therapeutic Implications - Promotion of tumor type-specific level of evidence for an alteration

| Gene | Mutation | Cancer Type | Level-associated Drug(s) in OncoKB™ | Previous Level | Updated Level | Evidence |
| :---- | :------------------ | :------------------------- | :-------------------------------------------------------------------------------------------------------------------------------------------------------- | :------------- | :------------ | :--------------------------------------------------------------------------------------------------------------------------- |
| FGFR1 | Fusions | Pancreatic Cancer | _Drug(s) promoted in OncoKB™:_ Erdafitnib (Level 2, previously Level 4\)<br/><br/>_Drug(s) remaining in OncoKB™:_ Fexagratinib (Level 4\) | 4 | 2 | Inclusion in Pancreatic Cancer NCCN Guidelines V2.2025; PMID: [37541273](https://pubmed.ncbi.nlm.nih.gov/37541273/) |
| FGFR2 | Fusions | Pancreatic Cancer | _Drug(s) promoted in OncoKB™:_ Erdafitnib (Level 2, previously Level 4\)<br/><br/>_Drug(s) remaining in OncoKB™:_ Fexagratinib (Level 4\) | 4 | 2 | Inclusion in Pancreatic Cancer NCCN Guidelines V2.2025; PMID: [37541273](https://pubmed.ncbi.nlm.nih.gov/37541273/) |
| FGFR2 | Oncogenic Mutations | Non-Small Cell Lung Cancer | _Drug(s) promoted in OncoKB™:_ Erdafitnib (Level 2, previously Level 4\)<br/><br/>_Drug(s) remaining in OncoKB™:_ Fexagratinib, Lirafugratinib (Level 4\) | 4 | 2 | Inclusion in Non-Small Cell Lung Cancer NCCN Guidelines V3.2025; PMID: [37541273](https://pubmed.ncbi.nlm.nih.gov/37541273/) |
| FGFR3 | Oncogenic Mutations | Non-Small Cell Lung Cancer | _Drug(s) promoted in OncoKB™:_ Erdafitnib (Level 2, previously Level 4\)<br/><br/>_Drug(s) remaining in OncoKB™:_ Fexagratinib (Level 4\) | 4 | 2 | Inclusion in Non-Small Cell Lung Cancer NCCN Guidelines V3.2025; PMID: [37541273](https://pubmed.ncbi.nlm.nih.gov/37541273/) |
| Gene | Mutation | Cancer Type | Level-associated Drug(s) in OncoKB™ | Previous Level | Updated Level | Evidence |
| :---- | :------------------ | :------------------------- | :---------------------------------------------------------------------------------------------------------------------------------------------------------------- | :------------- | :------------ | :--------------------------------------------------------------------------------------------------------------------------- |
| FGFR1 | Fusions | Pancreatic Cancer | _Drug(s) promoted in OncoKB™:_<br/>Erdafitnib (Level 2, previously Level 4\)<br/><br/>_Drug(s) remaining in OncoKB™:_<br/>Fexagratinib (Level 4\) | 4 | 2 | Inclusion in Pancreatic Cancer NCCN Guidelines V2.2025; PMID: [37541273](https://pubmed.ncbi.nlm.nih.gov/37541273/) |
| FGFR2 | Fusions | Pancreatic Cancer | _Drug(s) promoted in OncoKB™:_<br/>Erdafitnib (Level 2, previously Level 4\)<br/><br/>_Drug(s) remaining in OncoKB™:_<br/>Fexagratinib (Level 4\) | 4 | 2 | Inclusion in Pancreatic Cancer NCCN Guidelines V2.2025; PMID: [37541273](https://pubmed.ncbi.nlm.nih.gov/37541273/) |
| FGFR2 | Oncogenic Mutations | Non-Small Cell Lung Cancer | _Drug(s) promoted in OncoKB™:_<br/>Erdafitnib (Level 2, previously Level 4\)<br/><br/>_Drug(s) remaining in OncoKB™:_<br/>Fexagratinib, Lirafugratinib (Level 4\) | 4 | 2 | Inclusion in Non-Small Cell Lung Cancer NCCN Guidelines V3.2025; PMID: [37541273](https://pubmed.ncbi.nlm.nih.gov/37541273/) |
| FGFR3 | Oncogenic Mutations | Non-Small Cell Lung Cancer | _Drug(s) promoted in OncoKB™:_<br/>Erdafitnib (Level 2, previously Level 4\)<br/><br/>_Drug(s) remaining in OncoKB™:_<br/>Fexagratinib (Level 4\) | 4 | 2 | Inclusion in Non-Small Cell Lung Cancer NCCN Guidelines V3.2025; PMID: [37541273](https://pubmed.ncbi.nlm.nih.gov/37541273/) |

- Updated Therapeutic Implications - Addition of drug(s) associated with a tumor type-specific leveled alteration(s) currently in OncoKB™ (without changing the alteration's highest level of evidence)

| Level | Gene | Mutation | Cancer Type | Level-Associated Drug(s) in OncoKB™ | Drug(s) Added to OncoKBTM | Evidence |
| :---- | :--- | :------- | :---------------- | :---------------------------------- | :---------------------------------------------------- | :------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
| 1 | BRAF | V600E | Colorectal Cancer | Encorafenib \+ Cetuximab (Level 1\) | Encorafenib \+ Cetuximab \+ FOLFOX Regimen (Level 1\) | [FDA approval of encorafenib with cetuximab and mFOLFOX6](https://www.fda.gov/drugs/resources-information-approved-drugs/fda-grants-accelerated-approval-encorafenib-cetuximab-and-mfolfox6-metastatic-colorectal-cancer-braf); PMID: [39863775](https://pubmed.ncbi.nlm.nih.gov/39863775/) |

- Addition of 4 new genes:
####

- Addition of 8 new genes:
- ALOX5
- APEX1
- CBLB
- DHX15
- POLH
- RPS6KB1
- TACSTD2
- WEE1

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