Reformat files

.github/ISSUE_TEMPLATE/bug_report.md

@@ -26,4 +26,3 @@ assignees: ''
  - C++ compiler and version: [e.g., g++ (GCC) 4.8.5]
  - MPI implementation and version: [e.g., OpenMPI 3.0.0]
  - SU2 Version: [e.g., v6.2.0]
-

.github/release.yml

@@ -17,4 +17,3 @@ changelog:
       - title: 'Other Changes'
         labels:
           - "*"
-

.github/workflows/release-management.yml

@@ -65,4 +65,3 @@ jobs:
           asset_path: ${{matrix.os_bin}}.zip
           asset_name: SU2-${{ steps.update_release.outputs.tagname }}-${{matrix.os_bin}}.zip
           asset_content_type: application/zip
-

.lgtm.yml

@@ -1,7 +1,7 @@
 extraction:
   cpp:
      prepare:
-        packages: 
+        packages:
           - libboost-all-dev
      configure:
         command:

.travis.yml

@@ -6,10 +6,10 @@ sudo: required
 
 language: c++
 
-cache: 
+cache:
     - ccache
     - pip
-    - directories: 
+    - directories:
       - $HOME/.pyenv_cache
 
 compiler:
@@ -19,7 +19,7 @@ notifications:
     email:
         recipients:
             - [email protected]
-  
+
 branches:
     only:
         - develop
@@ -81,7 +81,7 @@ before_script:
 
     # Get the tutorial cases
     - git clone --depth=1 -b develop https://github.com/su2code/su2code.github.io ./Tutorials
-    
+
     # Enter the SU2/TestCases/ directory, which is now ready to run
     - cd TestCases/
 

CODE_OF_CONDUCT.md

@@ -28,7 +28,7 @@ Examples of unacceptable behavior by participants include:
 * Trolling, insulting/derogatory comments, and personal or political attacks.
 * Public or private harassment.
 * Publishing others' private information, such as a physical or electronic
-  address, without explicit permission. 
+  address, without explicit permission.
 * Other conduct which could reasonably be considered inappropriate in a
   professional setting.
 
@@ -67,7 +67,7 @@ faith may face temporary or permanent repercussions as determined by other
 members of the project's leadership.
 
 Consequences may include:
-* Downgrade or removal of repository permissions such as admin and write 
+* Downgrade or removal of repository permissions such as admin and write
   permissions.
 * Removal from the su2code organization on Github.
 * Being blocked from the su2code repository.
@@ -79,4 +79,3 @@ This Code of Conduct is adapted from the [Contributor Covenant][homepage], versi
 available at https://www.contributor-covenant.org/version/1/4/code-of-conduct.html
 
 [homepage]: https://www.contributor-covenant.org
-

COPYING

@@ -55,7 +55,7 @@ modified by someone else and passed on, the recipients should know
 that what they have is not the original version, so that the original
 author's reputation will not be affected by problems that might be
 introduced by others.
-
+
   Finally, software patents pose a constant threat to the existence of
 any free program.  We wish to make sure that a company cannot
 effectively restrict the users of a free program by obtaining a
@@ -111,7 +111,7 @@ modification follow.  Pay close attention to the difference between a
 "work based on the library" and a "work that uses the library".  The
 former contains code derived from the library, whereas the latter must
 be combined with the library in order to run.
-
+
                   GNU LESSER GENERAL PUBLIC LICENSE
    TERMS AND CONDITIONS FOR COPYING, DISTRIBUTION AND MODIFICATION
 
@@ -158,7 +158,7 @@ Library.
   You may charge a fee for the physical act of transferring a copy,
 and you may at your option offer warranty protection in exchange for a
 fee.
-
+
   2. You may modify your copy or copies of the Library or any portion
 of it, thus forming a work based on the Library, and copy and
 distribute such modifications or work under the terms of Section 1
@@ -216,7 +216,7 @@ instead of to this License.  (If a newer version than version 2 of the
 ordinary GNU General Public License has appeared, then you can specify
 that version instead if you wish.)  Do not make any other change in
 these notices.
-
+
   Once this change is made in a given copy, it is irreversible for
 that copy, so the ordinary GNU General Public License applies to all
 subsequent copies and derivative works made from that copy.
@@ -267,7 +267,7 @@ Library will still fall under Section 6.)
 distribute the object code for the work under the terms of Section 6.
 Any executables containing that work also fall under Section 6,
 whether or not they are linked directly with the Library itself.
-
+
   6. As an exception to the Sections above, you may also combine or
 link a "work that uses the Library" with the Library to produce a
 work containing portions of the Library, and distribute that work
@@ -329,7 +329,7 @@ restrictions of other proprietary libraries that do not normally
 accompany the operating system.  Such a contradiction means you cannot
 use both them and the Library together in an executable that you
 distribute.
-
+
   7. You may place library facilities that are a work based on the
 Library side-by-side in a single library together with other library
 facilities not covered by this License, and distribute such a combined
@@ -370,7 +370,7 @@ subject to these terms and conditions.  You may not impose any further
 restrictions on the recipients' exercise of the rights granted herein.
 You are not responsible for enforcing compliance by third parties with
 this License.
-
+
   11. If, as a consequence of a court judgment or allegation of patent
 infringement or for any other reason (not limited to patent issues),
 conditions are imposed on you (whether by court order, agreement or
@@ -422,7 +422,7 @@ conditions either of that version or of any later version published by
 the Free Software Foundation.  If the Library does not specify a
 license version number, you may choose any version ever published by
 the Free Software Foundation.
-
+
   14. If you wish to incorporate parts of the Library into other free
 programs whose distribution conditions are incompatible with these,
 write to the author to ask for permission.  For software which is
@@ -455,4 +455,4 @@ FAILURE OF THE LIBRARY TO OPERATE WITH ANY OTHER SOFTWARE), EVEN IF
 SUCH HOLDER OR OTHER PARTY HAS BEEN ADVISED OF THE POSSIBILITY OF SUCH
 DAMAGES.
 
-                     END OF TERMS AND CONDITIONS
+                     END OF TERMS AND CONDITIONS

Common/include/adt/CADTBaseClass.hpp

@@ -43,51 +43,47 @@ using namespace std;
  * \author E. van der Weide
  */
 class CADTBaseClass {
-protected:
-  unsigned long  nLeaves;   /*!< \brief Number of leaves in the ADT. */
-  unsigned short nDimADT;   /*!< \brief Number of dimensions of the ADT. */
-  bool           isEmpty;   /*!< \brief Whether or not the ADT is empty. */
+ protected:
+  unsigned long nLeaves;  /*!< \brief Number of leaves in the ADT. */
+  unsigned short nDimADT; /*!< \brief Number of dimensions of the ADT. */
+  bool isEmpty;           /*!< \brief Whether or not the ADT is empty. */
 
   vector<CADTNodeClass> leaves; /*!< \brief Vector, which contains all the leaves of the ADT. */
 
 #ifdef HAVE_OMP
   vector<vector<unsigned long> > FrontLeaves;    /*!< \brief Vector used in the tree traversal. */
   vector<vector<unsigned long> > FrontLeavesNew; /*!< \brief Vector used in the tree traversal. */
 #else
-  array<vector<unsigned long>,1> FrontLeaves;
-  array<vector<unsigned long>,1> FrontLeavesNew;
+  array<vector<unsigned long>, 1> FrontLeaves;
+  array<vector<unsigned long>, 1> FrontLeavesNew;
 #endif
-private:
+ private:
   vector<su2double> coorMinLeaves; /*!< \brief Vector, which contains all the minimum coordinates
                                                of the leaves. */
   vector<su2double> coorMaxLeaves; /*!< \brief Vector, which contains all the maximum coordinates
                                                of the leaves. */
-protected:
+ protected:
   /*!
    * \brief Constructor of the class. Nothing to be done.
    */
   CADTBaseClass() = default;
 
   /*--- Disable copy operations ---*/
-  CADTBaseClass(const CADTBaseClass &) = delete;
-  CADTBaseClass& operator=(const CADTBaseClass &) = delete;
+  CADTBaseClass(const CADTBaseClass&) = delete;
+  CADTBaseClass& operator=(const CADTBaseClass&) = delete;
 
   /*!
    * \brief Function, which builds the ADT of the given coordinates.
    * \param[in] nDim    Number of dimensions of the ADT.
    * \param[in] nPoints Number of points present in the ADT.
    * \param[in] coor    Coordinates of the points.
    */
-  void BuildADT(unsigned short  nDim,
-                unsigned long   nPoints,
-                const su2double *coor);
-
-public:
+  void BuildADT(unsigned short nDim, unsigned long nPoints, const su2double* coor);
 
+ public:
   /*!
    * \brief Function, which returns whether or not the ADT is empty.
    * \return  Whether or not the ADT is empty.
    */
-  inline bool IsEmpty(void) const { return isEmpty;}
-
+  inline bool IsEmpty(void) const { return isEmpty; }
 };

Common/include/adt/CADTComparePointClass.hpp

@@ -35,35 +35,32 @@
  * \author E. van der Weide
  */
 class CADTComparePointClass {
-private:
-  const su2double      *pointCoor;      /*!< \brief Pointer to the coordinates of the points. */
-  const unsigned short splitDirection;  /*!< \brief Split direction used in the sorting. */
-  const unsigned short nDim;            /*!< \brief Number of spatial dimensions stored in the coordinates. */
+ private:
+  const su2double* pointCoor;          /*!< \brief Pointer to the coordinates of the points. */
+  const unsigned short splitDirection; /*!< \brief Split direction used in the sorting. */
+  const unsigned short nDim;           /*!< \brief Number of spatial dimensions stored in the coordinates. */
 
-public:
+ public:
   /*!
    * \brief Constructor of the class. The member variables are initialized.
    * \param[in] coor      Pointer to the coordinates of the points.
    * \param[in] splitDir  Direction that must be used to sort the coordinates.
    * \param[in] nDimADT   Number of spatial dimensions of the ADT and coordinates.
    */
-  CADTComparePointClass(const su2double      *coor,
-                        const unsigned short splitDir,
-                        const unsigned short nDimADT) : pointCoor(coor), splitDirection(splitDir), nDim(nDimADT) {}
+  CADTComparePointClass(const su2double* coor, const unsigned short splitDir, const unsigned short nDimADT)
+      : pointCoor(coor), splitDirection(splitDir), nDim(nDimADT) {}
 
   /*!
    * \brief Operator used for the sorting of the points.
    * \param[in] p0  Index of the first point to be compared.
    * \param[in] p1  Index of the second point to be compared.
    */
-  inline bool operator()(const unsigned long p0,
-                         const unsigned long p1) const {
-    return pointCoor[nDim*p0+splitDirection] < pointCoor[nDim*p1+splitDirection];
+  inline bool operator()(const unsigned long p0, const unsigned long p1) const {
+    return pointCoor[nDim * p0 + splitDirection] < pointCoor[nDim * p1 + splitDirection];
   }
 
   /*!
    * \brief Default constructor of the class, disabled.
    */
   CADTComparePointClass() = delete;
-
 };