Fixed colab links

justinbois · Jun 13, 2024 · b67032a · b67032a
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diff --git a/2024/exercises/exercise_1/exercise_1.1.html b/2024/exercises/exercise_1/exercise_1.1.html
@@ -160,7 +160,7 @@
 
 
 
-            <a href="https://colab.research.google.com/github/justinbois/bootcamp/blob/gh-pages/2024/exercises/exercise_1/exercise_1.1" target="_blank"><img src="https://colab.research.google.com/assets/colab-badge.svg" alt="Open in Google Colab" title="Open in Google Colab"></a> | <a href="../../_sources/exercises/exercise_1/exercise_1.1.ipynb.txt" rel="nofollow"> Download notebook</a>
+            <a href="https://colab.research.google.com/github/justinbois/bootcamp/blob/gh-pages/2024/exercises/exercise_1/exercise_1.1.ipynb" target="_blank"><img src="https://colab.research.google.com/assets/colab-badge.svg" alt="Open in Google Colab" title="Open in Google Colab"></a> | <a href="../../_sources/exercises/exercise_1/exercise_1.1.ipynb.txt" rel="nofollow"> Download notebook</a>
 
 
 
@@ -209,11 +209,11 @@ <h1>Exercise 1.1: Command line exercises<a class="headerlink" href="#Exercise-1.
 
   <div role="contentinfo">
     <p>
-      <span class="lastupdated">Last updated on Jun 12, 2024.
+      <span class="lastupdated">Last updated on Jun 13, 2024.
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-   <jinja2.runtime.BlockReference object at 0x1390e9290> 
+   <jinja2.runtime.BlockReference object at 0x13512bcd0> 
 
 <p>© 2015–2024 Justin Bois. With the exception of pasted graphics, where the source is noted, this work is licensed under a <a rel="license" href="https://creativecommons.org/licenses/by/4.0/">Creative Commons Attribution License CC-BY 4.0</a>. All code contained herein is licensed under an <a rel="license" href="https://opensource.org/licenses/MIT">MIT license</a>.</p>
 

diff --git a/2024/exercises/exercise_1/exercise_1.2.html b/2024/exercises/exercise_1/exercise_1.2.html
@@ -160,7 +160,7 @@
 
 
 
-            <a href="https://colab.research.google.com/github/justinbois/bootcamp/blob/gh-pages/2024/exercises/exercise_1/exercise_1.2" target="_blank"><img src="https://colab.research.google.com/assets/colab-badge.svg" alt="Open in Google Colab" title="Open in Google Colab"></a> | <a href="../../_sources/exercises/exercise_1/exercise_1.2.ipynb.txt" rel="nofollow"> Download notebook</a>
+            <a href="https://colab.research.google.com/github/justinbois/bootcamp/blob/gh-pages/2024/exercises/exercise_1/exercise_1.2.ipynb" target="_blank"><img src="https://colab.research.google.com/assets/colab-badge.svg" alt="Open in Google Colab" title="Open in Google Colab"></a> | <a href="../../_sources/exercises/exercise_1/exercise_1.2.ipynb.txt" rel="nofollow"> Download notebook</a>
 
 
 
@@ -207,11 +207,11 @@ <h1>Exercise 1.2: Making an rc file<a class="headerlink" href="#Exercise-1.2:-Ma
 
   <div role="contentinfo">
     <p>
-      <span class="lastupdated">Last updated on Jun 12, 2024.
+      <span class="lastupdated">Last updated on Jun 13, 2024.
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-   <jinja2.runtime.BlockReference object at 0x1392c5650> 
+   <jinja2.runtime.BlockReference object at 0x13542e610> 
 
 <p>© 2015–2024 Justin Bois. With the exception of pasted graphics, where the source is noted, this work is licensed under a <a rel="license" href="https://creativecommons.org/licenses/by/4.0/">Creative Commons Attribution License CC-BY 4.0</a>. All code contained herein is licensed under an <a rel="license" href="https://opensource.org/licenses/MIT">MIT license</a>.</p>
 

diff --git a/2024/exercises/exercise_1/exercise_1.3.html b/2024/exercises/exercise_1/exercise_1.3.html
@@ -161,7 +161,7 @@
 
 
 
-            <a href="https://colab.research.google.com/github/justinbois/bootcamp/blob/gh-pages/2024/exercises/exercise_1/exercise_1.3" target="_blank"><img src="https://colab.research.google.com/assets/colab-badge.svg" alt="Open in Google Colab" title="Open in Google Colab"></a> | <a href="../../_sources/exercises/exercise_1/exercise_1.3.ipynb.txt" rel="nofollow"> Download notebook</a>
+            <a href="https://colab.research.google.com/github/justinbois/bootcamp/blob/gh-pages/2024/exercises/exercise_1/exercise_1.3.ipynb" target="_blank"><img src="https://colab.research.google.com/assets/colab-badge.svg" alt="Open in Google Colab" title="Open in Google Colab"></a> | <a href="../../_sources/exercises/exercise_1/exercise_1.3.ipynb.txt" rel="nofollow"> Download notebook</a>
 
 
 
@@ -199,11 +199,11 @@ <h1>Exercise 1.3: Time and type conversions<a class="headerlink" href="#Exercise
 
   <div role="contentinfo">
     <p>
-      <span class="lastupdated">Last updated on Jun 12, 2024.
+      <span class="lastupdated">Last updated on Jun 13, 2024.
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-   <jinja2.runtime.BlockReference object at 0x14d6e6290> 
+   <jinja2.runtime.BlockReference object at 0x137c76790> 
 
 <p>© 2015–2024 Justin Bois. With the exception of pasted graphics, where the source is noted, this work is licensed under a <a rel="license" href="https://creativecommons.org/licenses/by/4.0/">Creative Commons Attribution License CC-BY 4.0</a>. All code contained herein is licensed under an <a rel="license" href="https://opensource.org/licenses/MIT">MIT license</a>.</p>
 

diff --git a/2024/exercises/exercise_1/exercise_1.4.html b/2024/exercises/exercise_1/exercise_1.4.html
@@ -160,7 +160,7 @@
 
 
 
-            <a href="https://colab.research.google.com/github/justinbois/bootcamp/blob/gh-pages/2024/exercises/exercise_1/exercise_1.4" target="_blank"><img src="https://colab.research.google.com/assets/colab-badge.svg" alt="Open in Google Colab" title="Open in Google Colab"></a> | <a href="../../_sources/exercises/exercise_1/exercise_1.4.ipynb.txt" rel="nofollow"> Download notebook</a>
+            <a href="https://colab.research.google.com/github/justinbois/bootcamp/blob/gh-pages/2024/exercises/exercise_1/exercise_1.4.ipynb" target="_blank"><img src="https://colab.research.google.com/assets/colab-badge.svg" alt="Open in Google Colab" title="Open in Google Colab"></a> | <a href="../../_sources/exercises/exercise_1/exercise_1.4.ipynb.txt" rel="nofollow"> Download notebook</a>
 
 
 
@@ -191,11 +191,11 @@ <h1>Exercise 1.4: Using string methods<a class="headerlink" href="#Exercise-1.4:
 
   <div role="contentinfo">
     <p>
-      <span class="lastupdated">Last updated on Jun 12, 2024.
+      <span class="lastupdated">Last updated on Jun 13, 2024.
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-   <jinja2.runtime.BlockReference object at 0x14d68d850> 
+   <jinja2.runtime.BlockReference object at 0x137c1d690> 
 
 <p>© 2015–2024 Justin Bois. With the exception of pasted graphics, where the source is noted, this work is licensed under a <a rel="license" href="https://creativecommons.org/licenses/by/4.0/">Creative Commons Attribution License CC-BY 4.0</a>. All code contained herein is licensed under an <a rel="license" href="https://opensource.org/licenses/MIT">MIT license</a>.</p>
 

diff --git a/2024/exercises/exercise_1/exercise_1.5.html b/2024/exercises/exercise_1/exercise_1.5.html
@@ -160,7 +160,7 @@
 
 
 
-            <a href="https://colab.research.google.com/github/justinbois/bootcamp/blob/gh-pages/2024/exercises/exercise_1/exercise_1.5" target="_blank"><img src="https://colab.research.google.com/assets/colab-badge.svg" alt="Open in Google Colab" title="Open in Google Colab"></a> | <a href="../../_sources/exercises/exercise_1/exercise_1.5.ipynb.txt" rel="nofollow"> Download notebook</a>
+            <a href="https://colab.research.google.com/github/justinbois/bootcamp/blob/gh-pages/2024/exercises/exercise_1/exercise_1.5.ipynb" target="_blank"><img src="https://colab.research.google.com/assets/colab-badge.svg" alt="Open in Google Colab" title="Open in Google Colab"></a> | <a href="../../_sources/exercises/exercise_1/exercise_1.5.ipynb.txt" rel="nofollow"> Download notebook</a>
 
 
 
@@ -225,11 +225,11 @@ <h1>Exercise 1.5: Longest common substring<a class="headerlink" href="#Exercise-
 
   <div role="contentinfo">
     <p>
-      <span class="lastupdated">Last updated on Jun 12, 2024.
+      <span class="lastupdated">Last updated on Jun 13, 2024.
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   </div>
 
-   <jinja2.runtime.BlockReference object at 0x14d6a2750> 
+   <jinja2.runtime.BlockReference object at 0x137c31790> 
 
 <p>© 2015–2024 Justin Bois. With the exception of pasted graphics, where the source is noted, this work is licensed under a <a rel="license" href="https://creativecommons.org/licenses/by/4.0/">Creative Commons Attribution License CC-BY 4.0</a>. All code contained herein is licensed under an <a rel="license" href="https://opensource.org/licenses/MIT">MIT license</a>.</p>
 

diff --git a/2024/exercises/exercise_1/exercise_1.6.html b/2024/exercises/exercise_1/exercise_1.6.html
@@ -163,7 +163,7 @@
 
 
 
-            <a href="https://colab.research.google.com/github/justinbois/bootcamp/blob/gh-pages/2024/exercises/exercise_1/exercise_1.6" target="_blank"><img src="https://colab.research.google.com/assets/colab-badge.svg" alt="Open in Google Colab" title="Open in Google Colab"></a> | <a href="../../_sources/exercises/exercise_1/exercise_1.6.ipynb.txt" rel="nofollow"> Download notebook</a>
+            <a href="https://colab.research.google.com/github/justinbois/bootcamp/blob/gh-pages/2024/exercises/exercise_1/exercise_1.6.ipynb" target="_blank"><img src="https://colab.research.google.com/assets/colab-badge.svg" alt="Open in Google Colab" title="Open in Google Colab"></a> | <a href="../../_sources/exercises/exercise_1/exercise_1.6.ipynb.txt" rel="nofollow"> Download notebook</a>
 
 
 
@@ -231,11 +231,11 @@ <h2>RNA secondary structure validator<a class="headerlink" href="#RNA-secondary-
 
   <div role="contentinfo">
     <p>
-      <span class="lastupdated">Last updated on Jun 12, 2024.
+      <span class="lastupdated">Last updated on Jun 13, 2024.
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-   <jinja2.runtime.BlockReference object at 0x14d78b610> 
+   <jinja2.runtime.BlockReference object at 0x137d1ac10> 
 
 <p>© 2015–2024 Justin Bois. With the exception of pasted graphics, where the source is noted, this work is licensed under a <a rel="license" href="https://creativecommons.org/licenses/by/4.0/">Creative Commons Attribution License CC-BY 4.0</a>. All code contained herein is licensed under an <a rel="license" href="https://opensource.org/licenses/MIT">MIT license</a>.</p>
 

diff --git a/2024/exercises/exercise_1/index.html b/2024/exercises/exercise_1/index.html
@@ -198,11 +198,11 @@ <h1>Exercise 1<a class="headerlink" href="#exercise-1" title="Link to this headi
 
   <div role="contentinfo">
     <p>
-      <span class="lastupdated">Last updated on Jun 12, 2024.
+      <span class="lastupdated">Last updated on Jun 13, 2024.
       </span></p>
   </div>
 
-   <jinja2.runtime.BlockReference object at 0x14d76aed0> 
+   <jinja2.runtime.BlockReference object at 0x137c63dd0> 
 
 <p>© 2015–2024 Justin Bois. With the exception of pasted graphics, where the source is noted, this work is licensed under a <a rel="license" href="https://creativecommons.org/licenses/by/4.0/">Creative Commons Attribution License CC-BY 4.0</a>. All code contained herein is licensed under an <a rel="license" href="https://opensource.org/licenses/MIT">MIT license</a>.</p>
 

diff --git a/2024/exercises/exercise_2/exercise_2.1.html b/2024/exercises/exercise_2/exercise_2.1.html
@@ -158,7 +158,7 @@
 
 
 
-            <a href="https://colab.research.google.com/github/justinbois/bootcamp/blob/gh-pages/2024/exercises/exercise_2/exercise_2.1" target="_blank"><img src="https://colab.research.google.com/assets/colab-badge.svg" alt="Open in Google Colab" title="Open in Google Colab"></a> | <a href="../../_sources/exercises/exercise_2/exercise_2.1.ipynb.txt" rel="nofollow"> Download notebook</a>
+            <a href="https://colab.research.google.com/github/justinbois/bootcamp/blob/gh-pages/2024/exercises/exercise_2/exercise_2.1.ipynb" target="_blank"><img src="https://colab.research.google.com/assets/colab-badge.svg" alt="Open in Google Colab" title="Open in Google Colab"></a> | <a href="../../_sources/exercises/exercise_2/exercise_2.1.ipynb.txt" rel="nofollow"> Download notebook</a>
 
 
 
@@ -192,11 +192,11 @@ <h1>Exercise 2.1: Parsing a FASTA file<a class="headerlink" href="#Exercise-2.1:
 
   <div role="contentinfo">
     <p>
-      <span class="lastupdated">Last updated on Jun 12, 2024.
+      <span class="lastupdated">Last updated on Jun 13, 2024.
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-   <jinja2.runtime.BlockReference object at 0x14d7c3a90> 
+   <jinja2.runtime.BlockReference object at 0x137d4f010> 
 
 <p>© 2015–2024 Justin Bois. With the exception of pasted graphics, where the source is noted, this work is licensed under a <a rel="license" href="https://creativecommons.org/licenses/by/4.0/">Creative Commons Attribution License CC-BY 4.0</a>. All code contained herein is licensed under an <a rel="license" href="https://opensource.org/licenses/MIT">MIT license</a>.</p>
 

diff --git a/2024/exercises/exercise_2/exercise_2.2.html b/2024/exercises/exercise_2/exercise_2.2.html
@@ -158,7 +158,7 @@
 
 
 
-            <a href="https://colab.research.google.com/github/justinbois/bootcamp/blob/gh-pages/2024/exercises/exercise_2/exercise_2.2" target="_blank"><img src="https://colab.research.google.com/assets/colab-badge.svg" alt="Open in Google Colab" title="Open in Google Colab"></a> | <a href="../../_sources/exercises/exercise_2/exercise_2.2.ipynb.txt" rel="nofollow"> Download notebook</a>
+            <a href="https://colab.research.google.com/github/justinbois/bootcamp/blob/gh-pages/2024/exercises/exercise_2/exercise_2.2.ipynb" target="_blank"><img src="https://colab.research.google.com/assets/colab-badge.svg" alt="Open in Google Colab" title="Open in Google Colab"></a> | <a href="../../_sources/exercises/exercise_2/exercise_2.2.ipynb.txt" rel="nofollow"> Download notebook</a>
 
 
 
@@ -212,11 +212,11 @@ <h1>Exercise 2.2: Restriction enzyme cut sites<a class="headerlink" href="#Exerc
 
   <div role="contentinfo">
     <p>
-      <span class="lastupdated">Last updated on Jun 12, 2024.
+      <span class="lastupdated">Last updated on Jun 13, 2024.
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-   <jinja2.runtime.BlockReference object at 0x14d7f1590> 
+   <jinja2.runtime.BlockReference object at 0x137d7ce10> 
 
 <p>© 2015–2024 Justin Bois. With the exception of pasted graphics, where the source is noted, this work is licensed under a <a rel="license" href="https://creativecommons.org/licenses/by/4.0/">Creative Commons Attribution License CC-BY 4.0</a>. All code contained herein is licensed under an <a rel="license" href="https://opensource.org/licenses/MIT">MIT license</a>.</p>
 

diff --git a/2024/exercises/exercise_2/exercise_2.3.html b/2024/exercises/exercise_2/exercise_2.3.html
@@ -158,7 +158,7 @@
 
 
 
-            <a href="https://colab.research.google.com/github/justinbois/bootcamp/blob/gh-pages/2024/exercises/exercise_2/exercise_2.3" target="_blank"><img src="https://colab.research.google.com/assets/colab-badge.svg" alt="Open in Google Colab" title="Open in Google Colab"></a> | <a href="../../_sources/exercises/exercise_2/exercise_2.3.ipynb.txt" rel="nofollow"> Download notebook</a>
+            <a href="https://colab.research.google.com/github/justinbois/bootcamp/blob/gh-pages/2024/exercises/exercise_2/exercise_2.3.ipynb" target="_blank"><img src="https://colab.research.google.com/assets/colab-badge.svg" alt="Open in Google Colab" title="Open in Google Colab"></a> | <a href="../../_sources/exercises/exercise_2/exercise_2.3.ipynb.txt" rel="nofollow"> Download notebook</a>
 
 
 
@@ -210,11 +210,11 @@ <h1>Exercise 2.3: Pathogenicity islands<a class="headerlink" href="#Exercise-2.3
 
   <div role="contentinfo">
     <p>
-      <span class="lastupdated">Last updated on Jun 12, 2024.
+      <span class="lastupdated">Last updated on Jun 13, 2024.
       </span></p>
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-   <jinja2.runtime.BlockReference object at 0x14d6fe010> 
+   <jinja2.runtime.BlockReference object at 0x137c774d0> 
 
 <p>© 2015–2024 Justin Bois. With the exception of pasted graphics, where the source is noted, this work is licensed under a <a rel="license" href="https://creativecommons.org/licenses/by/4.0/">Creative Commons Attribution License CC-BY 4.0</a>. All code contained herein is licensed under an <a rel="license" href="https://opensource.org/licenses/MIT">MIT license</a>.</p>
 

diff --git a/2024/exercises/exercise_2/exercise_2.4.html b/2024/exercises/exercise_2/exercise_2.4.html
@@ -158,7 +158,7 @@
 
 
 
-            <a href="https://colab.research.google.com/github/justinbois/bootcamp/blob/gh-pages/2024/exercises/exercise_2/exercise_2.4" target="_blank"><img src="https://colab.research.google.com/assets/colab-badge.svg" alt="Open in Google Colab" title="Open in Google Colab"></a> | <a href="../../_sources/exercises/exercise_2/exercise_2.4.ipynb.txt" rel="nofollow"> Download notebook</a>
+            <a href="https://colab.research.google.com/github/justinbois/bootcamp/blob/gh-pages/2024/exercises/exercise_2/exercise_2.4.ipynb" target="_blank"><img src="https://colab.research.google.com/assets/colab-badge.svg" alt="Open in Google Colab" title="Open in Google Colab"></a> | <a href="../../_sources/exercises/exercise_2/exercise_2.4.ipynb.txt" rel="nofollow"> Download notebook</a>
 
 
 
@@ -203,11 +203,11 @@ <h1>Exercise 2.4: ORF detection<a class="headerlink" href="#Exercise-2.4:-ORF-de
 
   <div role="contentinfo">
     <p>
-      <span class="lastupdated">Last updated on Jun 12, 2024.
+      <span class="lastupdated">Last updated on Jun 13, 2024.
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-   <jinja2.runtime.BlockReference object at 0x14d8562d0> 
+   <jinja2.runtime.BlockReference object at 0x137de5f90> 
 
 <p>© 2015–2024 Justin Bois. With the exception of pasted graphics, where the source is noted, this work is licensed under a <a rel="license" href="https://creativecommons.org/licenses/by/4.0/">Creative Commons Attribution License CC-BY 4.0</a>. All code contained herein is licensed under an <a rel="license" href="https://opensource.org/licenses/MIT">MIT license</a>.</p>
 

diff --git a/2024/exercises/exercise_2/index.html b/2024/exercises/exercise_2/index.html
@@ -194,11 +194,11 @@ <h1>Exercise 2<a class="headerlink" href="#exercise-2" title="Link to this headi
 
   <div role="contentinfo">
     <p>
-      <span class="lastupdated">Last updated on Jun 12, 2024.
+      <span class="lastupdated">Last updated on Jun 13, 2024.
       </span></p>
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-   <jinja2.runtime.BlockReference object at 0x14d6f7050> 
+   <jinja2.runtime.BlockReference object at 0x137d255d0> 
 
 <p>© 2015–2024 Justin Bois. With the exception of pasted graphics, where the source is noted, this work is licensed under a <a rel="license" href="https://creativecommons.org/licenses/by/4.0/">Creative Commons Attribution License CC-BY 4.0</a>. All code contained herein is licensed under an <a rel="license" href="https://opensource.org/licenses/MIT">MIT license</a>.</p>
 

diff --git a/2024/exercises/exercise_3/exercise_3.1.html b/2024/exercises/exercise_3/exercise_3.1.html
@@ -160,7 +160,7 @@
 
 
 
-            <a href="https://colab.research.google.com/github/justinbois/bootcamp/blob/gh-pages/2024/exercises/exercise_3/exercise_3.1" target="_blank"><img src="https://colab.research.google.com/assets/colab-badge.svg" alt="Open in Google Colab" title="Open in Google Colab"></a> | <a href="../../_sources/exercises/exercise_3/exercise_3.1.ipynb.txt" rel="nofollow"> Download notebook</a>
+            <a href="https://colab.research.google.com/github/justinbois/bootcamp/blob/gh-pages/2024/exercises/exercise_3/exercise_3.1.ipynb" target="_blank"><img src="https://colab.research.google.com/assets/colab-badge.svg" alt="Open in Google Colab" title="Open in Google Colab"></a> | <a href="../../_sources/exercises/exercise_3/exercise_3.1.ipynb.txt" rel="nofollow"> Download notebook</a>
 
 
 
@@ -232,11 +232,11 @@ <h1>Exercise 3.1: Mastering .loc for Pandas data frames<a class="headerlink" hre
 
   <div role="contentinfo">
     <p>
-      <span class="lastupdated">Last updated on Jun 12, 2024.
+      <span class="lastupdated">Last updated on Jun 13, 2024.
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-   <jinja2.runtime.BlockReference object at 0x14d8a8c10> 
+   <jinja2.runtime.BlockReference object at 0x137e2f9d0> 
 
 <p>© 2015–2024 Justin Bois. With the exception of pasted graphics, where the source is noted, this work is licensed under a <a rel="license" href="https://creativecommons.org/licenses/by/4.0/">Creative Commons Attribution License CC-BY 4.0</a>. All code contained herein is licensed under an <a rel="license" href="https://opensource.org/licenses/MIT">MIT license</a>.</p>