Cardinalis_ddRAD

Scripts from my MA Thesis studying C. cardinalis, using ddRAD sequencing

Name		Name	Last commit message	Last commit date
Latest commit History 5 Commits
README.md		README.md
alleles_to_popSpecificAlleles.py		alleles_to_popSpecificAlleles.py
alleles_to_popSpecificAlleles_FIX.py		alleles_to_popSpecificAlleles_FIX.py
baseDisAmbig.py		baseDisAmbig.py
brianFasta_mac_goodforwindows.py		brianFasta_mac_goodforwindows.py
brianFasta_windows.py		brianFasta_windows.py
card_latlongplot.py		card_latlongplot.py
card_latlongplot_RECORDINGS.py		card_latlongplot_RECORDINGS.py
card_latlongplot_lesscircles.py		card_latlongplot_lesscircles.py
card_latlongplot_lesscircles_withcfb.py		card_latlongplot_lesscircles_withcfb.py
cardinal_script_namechange.py		cardinal_script_namechange.py
extractPopSpecificLoci.py		extractPopSpecificLoci.py
extractPopSpecificLoci_FIX.py		extractPopSpecificLoci_FIX.py
figure_scratch.py		figure_scratch.py
getFileNames.py		getFileNames.py
loci2consensus.py		loci2consensus.py
loci2gphocs_klp.py		loci2gphocs_klp.py
loci2gphocs_klp_scrapped.py		loci2gphocs_klp_scrapped.py
locus_splitter.py		locus_splitter.py
nested.py		nested.py
picklePrint.py		picklePrint.py
poolSwap.py		poolSwap.py
poolSwap_POOLS.py		poolSwap_POOLS.py
poolSwap_REDO.py		poolSwap_REDO.py
popCapLoci_loci.py		popCapLoci_loci.py
popCapLoci_unlinkedsnps.py		popCapLoci_unlinkedsnps.py
remove_onepop.py		remove_onepop.py
scratch_paper.py		scratch_paper.py
singlePopAlleles_unlinked.py		singlePopAlleles_unlinked.py
sizeRangeLociOnly.py		sizeRangeLociOnly.py
thesis_countLoci.py		thesis_countLoci.py

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