misc updates

kdm9 · Apr 19, 2023 · bfe231a · bfe231a
1 parent af89640
commit bfe231a
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Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/blsl/ildemux.py b/blsl/ildemux.py
@@ -105,7 +105,7 @@ def gethdrdat(hdr):
 
 def fqp2idx(fqp):
     """fastq pair to index pair ACGT+ACGT"""
-    s1, i1, ip1 = gethdrdat(fqp[0].rstrip("\n"))
+    s1, i1, ip1 = gethdrdat(fqp[0])
     s2, i2, ip2 = gethdrdat(fqp[4])
     assert(s1 == s2)
     assert(ip1 == ip2)

diff --git a/blsl/ilsample.py b/blsl/ilsample.py
@@ -28,7 +28,6 @@ def main(argv):
             help="Input fastq file")
     args=ap.parse_args(argv)
 
-
     if args.input.suffix == ".gz":
         stream = gzip.open(args.input, "rb")
     else:
@@ -43,5 +42,6 @@ def main(argv):
             args.out.write(b"".join(pair))
 
     print(f"Done! Sampled {sampled} of {total} pairs", file=stderr)
+
 if __name__ == "__main__":
     main()